Transcript Information: S_Transcript_160805.p1


Annotated TAIR IDAT4G29080.1
Annotated Gene Namephytochrome-associated protein 2
Annotated Gene Symbol(s)PAP2, IAA27
Annotation TypeOrtholog
Chromosome Positionchr4:14323665-14325213 | Reverse length=305
E-Value1.1E-76
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 196.276445644918
Replicate 267.729519413694
Replicate 359.3286546807
Condition 2: 8 Hour
Replicate 147.198106510714
Replicate 248.691670568817
Replicate 349.841467194001
Condition 3: 24 Hour
Replicate 148.910051638867
Replicate 254.493135187247
Replicate 358.047793373539


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160805.p1 GENE.S_Transcript_160805~~S_Transcript_160805.p1 ORF type:complete len:272 (+),score=71.45,AUX_IAA|PF02309.12|7.9e-83 S_Transcript_160805:449-1264(+)
ATGTCTAGGCCATTAGAGCATGATTACATAGGATTAACTGAAGTTCCTTCAATGGAGAGCAGTAGTTTAAAGACAGATTTGAGCCTAGGATTACCAGGGTCTGAGTCACCTGATAGGAAGTCTGGGTTTGCTGGTGGTGGGGTTACTCTTTTTGGCAAGGAACTTGAAGGAAATGGGGTTTCAATTGGGTCATTAAAGACTTGTTCTCTAAGAGCTAAAAGGGGGTTTTCTGATGCTATTGATGCTCCTGAAAAATGGGTTTTGTCTATTAATGGAAGATCTGAAGCTAATTTGAGTAAAGATGTGGCTGTGCCTTCTTCTCCTAAGACTGTTCTGGAGAATAAGCCTCAAGTTCCTGCTGCTAAGGCACAGGTGGTGGGATGGCCACCAGTTCGTTCATTTCGTAAGAATACGATGGCATCTAACTCCACAAAGAACAATGGTCACGCAGAAGAGAAATCGGTGTCTGCATGCCACTTTGTGAAGGTTAGTATGGATGGTGCTCCATACTTGAGGAAGGTTGATCTCCAAACCTATGCAAACTATCTGGAACTCTCATCTGCACTGGAGAAGATGTTTAGCTGCTTTATAACAGGTCAGTATGGTTCTGATGGGCATACGAGCTGTGATGGACTGAGTAAGAACCATTCAACTGATCATCTCCGTAGTTCTGAATATGTGCTCACCTATGAAGACAAGGACGGTGATTGGATGTTAGTTGGTGATGTCCCTTGGAAGATGTTCACGGAGAACTGCAGAAAACTCCGGATCATGAAGGGTTCAGAAGCCATTGGATTAGCTCCAAAGTGCAGCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160805.p1 GENE.S_Transcript_160805~~S_Transcript_160805.p1 ORF type:complete len:272 (+),score=71.45,AUX_IAA|PF02309.12|7.9e-83 S_Transcript_160805:449-1264(+)
MSRPLEHDYIGLTEVPSMESSSLKTDLSLGLPGSESPDRKSGFAGGGVTLFGKELEGNGVSIGSLKTCSLRAKRGFSDAIDAPEKWVLSINGRSEANLSKDVAVPSSPKTVLENKPQVPAAKAQVVGWPPVRSFRKNTMASNSTKNNGHAEEKSVSACHFVKVSMDGAPYLRKVDLQTYANYLELSSALEKMFSCFITGQYGSDGHTSCDGLSKNHSTDHLRSSEYVLTYEDKDGDWMLVGDVPWKMFTENCRKLRIMKGSEAIGLAPKCS*

Click here to download the sequence:
Link to NCBI Protein BLAST