Transcript Information: S_Transcript_160830.p1


Annotated TAIR IDAT5G17290.1
Annotated Gene Nameautophagy protein Apg5 family
Annotated Gene Symbol(s)ATG5, APG5, ATATG5
Annotation TypeOrtholog
Chromosome Positionchr5:5687160-5689821 | Reverse length=337
E-Value1.7E-105
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.6559200768557
Replicate 22.5494779044239
Replicate 31.3114834548338
Condition 2: 8 Hour
Replicate 15.0233141635913
Replicate 25.3692436735344
Replicate 32.8421130139975
Condition 3: 24 Hour
Replicate 12.524297647802
Replicate 22.6189293377113
Replicate 33.2508412788816


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160830.p1 GENE.S_Transcript_160830~~S_Transcript_160830.p1 ORF type:complete len:225 (+),score=28.63,APG5|PF04106.8|4.1e+03,APG5|PF04106.8|1.7e-37 S_Transcript_160830:267-941(+)
ATGGAGAAAGGAGGAACAGAGGCGCAGAAATACGTTTGGGGAGGAGCTATTCCCCTTCAAATTCATCTCCATCAATCTGAAGTCACCACCTTACCTCCCCCTCCTCCTTTTCTGATCTTAGCTCCACGGATAGGTTACCTTCCATTGCTAGCACCTCAAGTAAAACCTCTCTTCAGCAGCACCCTTCCTCCAGGGGCTGATACTGTGTGGTTTGAGTACAAGGGACTACCATTGAAGTGGTATATACCCACTGGCGTTCTCTTTGATCTTTTATGTGCGGAGCCTGAAAGACCCTGGAATCTCACAGTACACTTTAGAGGATATCCAGGCAACATACTAAGCCCATGTGAAAGTGAAGATGCTGTTAAGTGGAGCTTCATTAATTCTTTGAAGGAGGCTACCTACATTATTAATGGAAATTGCAAGAATATTATGAACATGTCCCAATCTGATCAGTCGGAGTTGTGGCGCTCTGTTTTAGATGGCAATTTGGAATTGTTTCTCAAGGTAACATCAAAGCTGAAGCTTGGAGCGATGGAGGATAAATACACTGCAAAATTATATCCGTCATTAAAATCTCGGCCTACTACTGGTAATGCGGATACTCTTGGACTTGTTAAAACAGGTAATTTAGAATTGAGGTCCATATCTAACCCCGGACCTTTGTATTTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160830.p1 GENE.S_Transcript_160830~~S_Transcript_160830.p1 ORF type:complete len:225 (+),score=28.63,APG5|PF04106.8|4.1e+03,APG5|PF04106.8|1.7e-37 S_Transcript_160830:267-941(+)
MEKGGTEAQKYVWGGAIPLQIHLHQSEVTTLPPPPPFLILAPRIGYLPLLAPQVKPLFSSTLPPGADTVWFEYKGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGNILSPCESEDAVKWSFINSLKEATYIINGNCKNIMNMSQSDQSELWRSVLDGNLELFLKVTSKLKLGAMEDKYTAKLYPSLKSRPTTGNADTLGLVKTGNLELRSISNPGPLYL*

Click here to download the sequence:
Link to NCBI Protein BLAST