Transcript Information: S_Transcript_160830.p2


Annotated TAIR IDAT5G17290.1
Annotated Gene Nameautophagy protein Apg5 family
Annotated Gene Symbol(s)ATG5, APG5, ATATG5
Annotation TypeHomolog
Chromosome Positionchr5:5687160-5689821 | Reverse length=337
E-Value9E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0114477677753
Replicate 21.6675364200447
Replicate 30.96502688809538
Condition 2: 8 Hour
Replicate 12.3557117210786
Replicate 21.9510333116041
Replicate 32.4785869308118
Condition 3: 24 Hour
Replicate 11.3970565023054
Replicate 21.5811961564893
Replicate 31.173118344424


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160830.p2 GENE.S_Transcript_160830~~S_Transcript_160830.p2 ORF type:complete len:172 (+),score=21.80,APG5|PF04106.8|8e-19 S_Transcript_160830:1422-1937(+)
ATGTTAATTTGCCCGTGTTTCAGTCTTTGCCTCTGTTATAGTTATATCAAATCGCCTGTCGAACTTCTAGCAGGCAGAATTCCAGTTAGGTTGTATGTGAGGATTTTTGCTGAGGCGTTTGATGATTTAGAAGATGCTCCAGAACTTGACAGCTGGGAGACAATCTCTTACATAAACAGACCCATTGAGACTGATAAACATGAAGGCAAATGCTTTACCTTAAGTGATGCTATGAAGACTCTCCTACCAGAGTACTACGGAGAAAGATCACGCAACAAGGAGGAAACAGTAGAGGTTGACGATACAAAAGCTGCGGAAGAGGGAGTTACAGCCATCACCGAACAAATCGAGTTCCAGCAACCATCAGAAAACGTTGAAATCAAGCTCATCAGAATTCAAGGGATTGAGCCAAGATCAGAGATCCCGTTCTCTTGGGTTGTCAACAATTTGATGAACCCCGATCACTACCTTCATGTATGTGTTTACTTGATTCGCTTGCAATCTGCTTCTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160830.p2 GENE.S_Transcript_160830~~S_Transcript_160830.p2 ORF type:complete len:172 (+),score=21.80,APG5|PF04106.8|8e-19 S_Transcript_160830:1422-1937(+)
MLICPCFSLCLCYSYIKSPVELLAGRIPVRLYVRIFAEAFDDLEDAPELDSWETISYINRPIETDKHEGKCFTLSDAMKTLLPEYYGERSRNKEETVEVDDTKAAEEGVTAITEQIEFQQPSENVEIKLIRIQGIEPRSEIPFSWVVNNLMNPDHYLHVCVYLIRLQSASL*

Click here to download the sequence:
Link to NCBI Protein BLAST