Transcript Information: S_Transcript_160831.p1


Annotated TAIR IDAT5G17290.1
Annotated Gene Nameautophagy protein Apg5 family
Annotated Gene Symbol(s)ATG5, APG5, ATATG5
Annotation TypeOrtholog
Chromosome Positionchr5:5687160-5689821 | Reverse length=337
E-Value6.9E-156
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8125366938039
Replicate 24.2142407019972
Replicate 34.2998513902777
Condition 2: 8 Hour
Replicate 15.2115420157039
Replicate 26.9754921320496
Replicate 34.7302021370605
Condition 3: 24 Hour
Replicate 13.8658080334478
Replicate 23.3104443875564
Replicate 33.2590282096498


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160831.p1 GENE.S_Transcript_160831~~S_Transcript_160831.p1 ORF type:complete len:356 (+),score=62.41,APG5|PF04106.8|1.2e+04,APG5|PF04106.8|1.2e-58 S_Transcript_160831:267-1334(+)
ATGGAGAAAGGAGGAACAGAGGCGCAGAAATACGTTTGGGGAGGAGCTATTCCCCTTCAAATTCATCTCCATCAATCTGAAGTCACCACCTTACCTCCCCCTCCTCCTTTTCTGATCTTAGCTCCACGGATAGGTTACCTTCCATTGCTAGCACCTCAAGTAAAACCTCTCTTCAGCAGCACCCTTCCTCCAGGGGCTGATACTGTGTGGTTTGAGTACAAGGGACTACCATTGAAGTGGTATATACCCACTGGCGTTCTCTTTGATCTTTTATGTGCGGAGCCTGAAAGACCCTGGAATCTCACAGTACACTTTAGAGGATATCCAGGCAACATACTAAGCCCATGTGAAAGTGAAGATGCTGTTAAGTGGAGCTTCATTAATTCTTTGAAGGAGGCTACCTACATTATTAATGGAAATTGCAAGAATATTATGAACATGTCCCAATCTGATCAGTCGGAGTTGTGGCGCTCTGTTTTAGATGGCAATTTGGAATTGTTTCTCAAGGTAACATCAAAGCTGAAGCTTGGAGCGATGGAGGATAAATACACTGCAAAATTATATCCGTCATTAAAATCTCGGCCTACTACTGGTAATGCGGATACTCTTGGACTTGTTAAAACAGGCAGAATTCCAGTTAGGTTGTATGTGAGGATTTTTGCTGAGGCGTTTGATGATTTAGAAGATGCTCCAGAACTTGACAGCTGGGAGACAATCTCTTACATAAACAGACCCATTGAGACTGATAAACATGAAGGCAAATGCTTTACCTTAAGTGATGCTATGAAGACTCTCCTACCAGAGTACTACGGAGAAAGATCACGCAACAAGCAGGAAACAGTAGAGGTTGATGATACAAAAGCTGCAGAAGAGGGAGCTACAGCCATCACCGAACAAATCGAGTTCCAGCAACCATCAGAAAACGTTGAAATCAAGCTCATCAGAATTCAAGGGATTGAGCCAAGACCAGTGATCCCGTTCTCTTGGGTTGTCAACAATTTGATGAACCCCGATCACTACCTTCATGTATGTGTTTACTTGATTCGCTTGCAATCTGCTTCTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160831.p1 GENE.S_Transcript_160831~~S_Transcript_160831.p1 ORF type:complete len:356 (+),score=62.41,APG5|PF04106.8|1.2e+04,APG5|PF04106.8|1.2e-58 S_Transcript_160831:267-1334(+)
MEKGGTEAQKYVWGGAIPLQIHLHQSEVTTLPPPPPFLILAPRIGYLPLLAPQVKPLFSSTLPPGADTVWFEYKGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGNILSPCESEDAVKWSFINSLKEATYIINGNCKNIMNMSQSDQSELWRSVLDGNLELFLKVTSKLKLGAMEDKYTAKLYPSLKSRPTTGNADTLGLVKTGRIPVRLYVRIFAEAFDDLEDAPELDSWETISYINRPIETDKHEGKCFTLSDAMKTLLPEYYGERSRNKQETVEVDDTKAAEEGATAITEQIEFQQPSENVEIKLIRIQGIEPRPVIPFSWVVNNLMNPDHYLHVCVYLIRLQSASL*

Click here to download the sequence:
Link to NCBI Protein BLAST