Transcript Information: S_Transcript_160834.p1


Annotated TAIR IDAT5G17290.1
Annotated Gene Nameautophagy protein Apg5 family
Annotated Gene Symbol(s)ATG5, APG5, ATATG5
Annotation TypeOrtholog
Chromosome Positionchr5:5687160-5689821 | Reverse length=337
E-Value1.7E-91
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.9490259897365
Replicate 23.5585144447604
Replicate 33.0936202462814
Condition 2: 8 Hour
Replicate 16.1912423501354
Replicate 24.9073732500046
Replicate 35.9821894891399
Condition 3: 24 Hour
Replicate 12.4663578134542
Replicate 22.9243627840448
Replicate 34.8816860138934


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160834.p1 GENE.S_Transcript_160834~~S_Transcript_160834.p1 ORF type:complete len:310 (+),score=53.45,APG5|PF04106.8|8.5e+03,APG5|PF04106.8|3.8e-32,APG5|PF04106.8|3.4e-18 S_Transcript_160834:267-1196(+)
ATGGAGAAAGGAGGAACAGAGGCGCAGAAATACGTTTGGGGAGGAGCTATTCCCCTTCAAATTCATCTCCATCAATCTGAAGTCACCACCTTACCTCCCCCTCCTCCTTTTCTGATCTTAGCTCCACGGATAGGTTACCTTCCATTGCTAGCACCTCAAGTAAAACCTCTCTTCAGCAGCACCCTTCCTCCAGGGGCTGATACTGTGTGGTTTGAGTACAAGGGACTACCATTGAAGTGGTATATACCCACTGGCGTTCTCTTTGATCTTTTATGTGCGGAGCCTGAAAGACCCTGGAATCTCACAGTACACTTTAGAGGATATCCAGGCAACATACTAAGCCCATGTGAAAGTGAAGATGCTGTTAAGTGGAGCTTCATTAATTCTTTGAAGGAGGCTACCTACATTATTAATGGAAATTGCAAGAATATTATGAACATGTCCCAATCTGATCAGTCGGAGTTGTGGCGCTCTGTTTTAGATGCAGGTAGAATTCCAGTTAGGTTGTATGTGAGGATTTTTGCTGAGGCGTTTGATGATTTAGAAGATGCTCCAGAACTTGACAGCTGGGAGACAATCTCTTACATAAACAGACCCATTGAGACTGATAAACATGAAGGCAAATGCTTTACCTTAAGTGATGCTATGAAGACTCTCCTACCAGAGTACTACGGAGAAAGATCACGCAACAAGGAGGAAACAGTAGAGGTTGACGATACAAAAGCTGCGGAAGAGGGAGTTACAGCCATCACCGAACAAATCGAGTTCCAGCAACCATCAGAAAACGTTGAAATCAAGCTCATCAGAATTCAAGGGATTGAGCCAAGACCAGAGATCCCATTGTCTTGGGTTGTCAACAATTTGATGAACCCCGATCACTACCTTCATGTATGTGTTTACTTGATTCGCTTGCAATCTGCTTCTTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160834.p1 GENE.S_Transcript_160834~~S_Transcript_160834.p1 ORF type:complete len:310 (+),score=53.45,APG5|PF04106.8|8.5e+03,APG5|PF04106.8|3.8e-32,APG5|PF04106.8|3.4e-18 S_Transcript_160834:267-1196(+)
MEKGGTEAQKYVWGGAIPLQIHLHQSEVTTLPPPPPFLILAPRIGYLPLLAPQVKPLFSSTLPPGADTVWFEYKGLPLKWYIPTGVLFDLLCAEPERPWNLTVHFRGYPGNILSPCESEDAVKWSFINSLKEATYIINGNCKNIMNMSQSDQSELWRSVLDAGRIPVRLYVRIFAEAFDDLEDAPELDSWETISYINRPIETDKHEGKCFTLSDAMKTLLPEYYGERSRNKEETVEVDDTKAAEEGVTAITEQIEFQQPSENVEIKLIRIQGIEPRPEIPLSWVVNNLMNPDHYLHVCVYLIRLQSASL*

Click here to download the sequence:
Link to NCBI Protein BLAST