Transcript Information: S_Transcript_16085.p1


Annotated TAIR IDAT1G77230.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:29016129-29017873 | Forward length=218
E-Value3.4E-64
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.405695026909
Replicate 22.11902498575
Replicate 31.1461587396588
Condition 2: 8 Hour
Replicate 12.5301310545751
Replicate 21.7695247511648
Replicate 32.0472847982185
Condition 3: 24 Hour
Replicate 12.2215135753147
Replicate 23.0730591967929
Replicate 30.85498455610563


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16085.p1 GENE.S_Transcript_16085~~S_Transcript_16085.p1 ORF type:5prime_partial len:177 (+),score=49.49,TPR_11|PF13414.2|1.4e-08,TPR_11|PF13414.2|0.00064,TPR_2|PF07719.13|0.0069,TPR_2|PF07719.13|4.8,TPR_2|PF07719.13|0.00015,TPR_1|PF00515.24|1.3,TPR_1|PF00515.24|1.4,TPR_1|PF00515.24|2.6e-05,TPR_16|PF13432.2|2.2e-05,TPR_16|PF13432.2|4.6e-05,TPR_16|PF13432.2|0.087,TPR_12|PF13424.2|5e-05,TPR_12|PF13424.2|0.00033,TPR_17|PF13431.2|41,TPR_17|PF13431.2|6.6,TPR_17|PF13431.2|0.00096,TPR_17|PF13431.2|9.9e+02,TPR_8|PF13181.2|5e+03,TPR_8|PF13181.2|1.2e+03,TPR_8|PF13181.2|1.6e+02,TPR_8|PF13181.2|0.0012 S_Transcript_16085:2-532(+)
GCATCCAATTCGAATTCCGATACTAGCCCTAAGCCCAACAAAACCCTAGATTATAACAATCCCAATCTTTCGGATGCTACTCTCGCTGATGCTTTCCTTCAACAGGGAAACAAACTTGCTGAGGATGGTAAATACCGTGAAGCACTTGGGAAGTGGGAGGCTGCTATTACTTTGATGCCTGAAAAGGCTGTTTCGCATGAACAGAAGGCTCAAGCACTACTTGAAATTGGGGATGCTTGGGGTGCTTTGAAGGCAGCAACTCGTGCCACTGAATTAGATCCGTCATGGGCTGAGGCTTTGACTACCCTTGGTAGGGCACAACTGAATTTTGGAGAGCCTGATAGTGCTATTGAAAGCTTTGACAAGGCGTTGGCTATTAAGCCTCAACTGGCCGAGGCTAAGAATGATAGACAAACTGCATCACAACTCATAAAGAAGAGAAAACAGCTTCATATGTCTGGTGTGAGTACAAATAAATCCCGTTTTGTGGTCGGTGATGGAGGCAAAAGCAACCTTCAGGATTGTGCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16085.p1 GENE.S_Transcript_16085~~S_Transcript_16085.p1 ORF type:5prime_partial len:177 (+),score=49.49,TPR_11|PF13414.2|1.4e-08,TPR_11|PF13414.2|0.00064,TPR_2|PF07719.13|0.0069,TPR_2|PF07719.13|4.8,TPR_2|PF07719.13|0.00015,TPR_1|PF00515.24|1.3,TPR_1|PF00515.24|1.4,TPR_1|PF00515.24|2.6e-05,TPR_16|PF13432.2|2.2e-05,TPR_16|PF13432.2|4.6e-05,TPR_16|PF13432.2|0.087,TPR_12|PF13424.2|5e-05,TPR_12|PF13424.2|0.00033,TPR_17|PF13431.2|41,TPR_17|PF13431.2|6.6,TPR_17|PF13431.2|0.00096,TPR_17|PF13431.2|9.9e+02,TPR_8|PF13181.2|5e+03,TPR_8|PF13181.2|1.2e+03,TPR_8|PF13181.2|1.6e+02,TPR_8|PF13181.2|0.0012 S_Transcript_16085:2-532(+)
ASNSNSDTSPKPNKTLDYNNPNLSDATLADAFLQQGNKLAEDGKYREALGKWEAAITLMPEKAVSHEQKAQALLEIGDAWGALKAATRATELDPSWAEALTTLGRAQLNFGEPDSAIESFDKALAIKPQLAEAKNDRQTASQLIKKRKQLHMSGVSTNKSRFVVGDGGKSNLQDCA*

Click here to download the sequence:
Link to NCBI Protein BLAST