Transcript Information: S_Transcript_16086.p1


Annotated TAIR IDAT1G77230.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:29016129-29017873 | Forward length=218
E-Value1E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2911855368036
Replicate 22.0455566477166
Replicate 30.97709860045566
Condition 2: 8 Hour
Replicate 12.1184162566688
Replicate 21.9260531941487
Replicate 31.9763037514552
Condition 3: 24 Hour
Replicate 12.025353436214
Replicate 23.0018293478606
Replicate 32.0044008798768


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16086.p1 GENE.S_Transcript_16086~~S_Transcript_16086.p1 ORF type:3prime_partial len:151 (+),score=43.58,TPR_11|PF13414.2|1.1e-05 S_Transcript_16086:57-452(+)
ATGAAGATGACATGGAAGAAGAAAAGCGGGAACAAACGATTAGCTGTCTCTCAATCTCAACTCTCCAATCTTCCATTTGAAACCCAACAACTAGACGATGATCATGAACCAACCCAAGAATCCAACTATCAAGCACCCAAATCAAATTCCGATGCTAGCCCTAAACCCAACAAAACCCTAGATTATAACAATCCCAATCTTTCGGATGCTACTCTCGCTGATGCTTTCCTTCAACAGGGAAACAAACTTGCTGAGGATGGTAAATACCGTGAAGCACTTGGGAAGTGGGAGGCTGCTATTACTTTGATGCCTGAAAAGGCTGTTTCGCATGAACAGAAGGCTCAAGCACTACTTGAAATTGGGGATGCTTGGGGTGCTTTGAAGGCAGCAACTCGT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16086.p1 GENE.S_Transcript_16086~~S_Transcript_16086.p1 ORF type:3prime_partial len:151 (+),score=43.58,TPR_11|PF13414.2|1.1e-05 S_Transcript_16086:57-452(+)
MKMTWKKKSGNKRLAVSQSQLSNLPFETQQLDDDHEPTQESNYQAPKSNSDASPKPNKTLDYNNPNLSDATLADAFLQQGNKLAEDGKYREALGKWEAAITLMPEKAVSHEQKAQALLEIGDAWGALKAATR

Click here to download the sequence:
Link to NCBI Protein BLAST