Transcript Information: S_Transcript_160930.p1


Annotated TAIR IDATMG00860.1
Annotated Gene NameDNA/RNA polymerases superfamily protein
Annotated Gene Symbol(s)ORF158
Annotation TypeHomolog
Chromosome PositionchrM:235916-236392 | Forward length=158
E-Value9E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8321669461793
Replicate 21.699117982259
Replicate 31.8292095298787
Condition 2: 8 Hour
Replicate 13.0855873971114
Replicate 24.2811939053853
Replicate 32.487263431153
Condition 3: 24 Hour
Replicate 13.0333035418678
Replicate 22.7767797147217
Replicate 31.9129905324767


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160930.p1 GENE.S_Transcript_160930~~S_Transcript_160930.p1 ORF type:3prime_partial len:857 (+),score=98.97,RVT_1|PF00078.23|4.6e-28,RVT_1|PF00078.23|2.6e+03,RVT_3|PF13456.2|1.5e-20,RNase_H|PF00075.20|3.1e-05 S_Transcript_160930:210-2570(+)
ATGGAAGCATCTTTGGCTGAGCTCACCAAGCAGGTGATTTGTGAACACGCTGATGTGTTTGCCCACTCCGTCGAGGATATGCCAGGCATTGACCCCTCGGTGGCCGAGCACAGACTCAACATCAAGGCCAATGTCTCCCCAGCCCAGCAGAAGAAAAGGAACATGGGACCGGAAAGATCCCAAGCAGCAAATGAAGAAGTAGGCAAGTTGTTGGAGGCCGGTTTCATCAGGGAGTGTCAATACCCGGGGTGGTTGTCCAACGTGGTCATGGTGCGAAAGGCAAACGGGTCGTGGAGGATGTGTGTAGACTTCACCGACCTAAACAAGGCCTGTCCGAAGGACCATCACCCCCTACCCCGGATAGACAGGCTGGTGGACTCAACAGCAAGCTATGCCATGCTCAGCTTCCTCGACGCCTTCTCGGGGTATCATCAGATACCACTCCACCGGGAGGACCAGGAAAACACTGCTTTCATTGTTGACCGAGGAGTCTACTGCTACCAGGTTATGCCATTCGGATTAAAGAATGCGGGTGCTACATACCAGAGGATGGTTGATAGGATGTTTGAAGGACAAATCGGACGCAACATGGAGGTGTACGTCGATGACATAATTGTTAAGAGCGAAACAGCGGAGCAGCACCCAGCCGATTTGAGAGAGACCTTTCAGTGTCTAAGGAGGCACAGGATGAAACTCAATCCCAAAAAATGCACCTTTGGCGTGTCCTCGGGCAAGTTCCTTGGTTTCCTGATCAGTCAGAGGGGGATTGATGTCAACCCGGACAAAGTGCAGGCCATAGCAGACATGAAACCCCCGAGGTCCATCAAGGAGGTGCAGAAGCTCGCCGGGTGCGTGGCGGCCTTGAGGCGGTTTATGTCCAAGTCGGCCGAAAAGTGCATGCCATTCTTCGATGTCTTAAAGAAGAAGGCTAAGTTTGAGTGGACTCAGGCTGCCCAGCTCTCCTTTGAGAAATTGAAGGAGCATTTGAGATCCCTGCCAAGGATGGTGAGCCCTGAGGTCGGGGAAACCCTTTACCTCTACCTCTCGGTATCTGAGGTGGCTGTAAGCTCGGTCTTGGTTGCTGAAAGGGATCAAGAGCAGAAACCGGTTTACTTCATCAGTCACGCCCTATGCGGTCCCCAGTTGCGCTACTCGGATTTGGAAAAGTTCGCCCTAGCTCTGCTGCTTACACACCGCAAGCTGTACCCCTACTTCCAATCAAACCAAGTAGTGGTCCTCACAAATCAACCATTGAAGAAGGTGATGGAGAGACTGGAGTGCGCCGGGCGCATGCAAGTATGGGCAACGGAGATGTCAGGCTCGGGGTGTCCCCAATATGAACCTCGACGGGCCATTAAGGCTCAGGCCCTGGCTGATTTCATAGTTGAATGTACTCGGGATGAAGAATACCTGGATTGCCCAATGACGGAGTGGTGGCGCCTCTTTGTAGATGGCTCTGCTACAATGAGAGGCAATGGAGCAGGGGTGATCATCATTGATCCGAGTGGCTACAAGTCAGAGTATGCGGTCAGGATCAACTTCAAAGCCTCCAACAACGAGACCGAGTATGAGGCACTCTTGAGTGGGCTCGGGATGGCAAGCTCGGCCAAAGCTCAAAAGGTAGATGTCTTCACTGACTCATTACTTGTAGCGGGGCAAATATCTGGGGAGTACTCGGCCAAGGAACCGCGTATGCAGCTCTACCTCGAGAAAGTGAAAGCAGTCTTGTCTACCTTCCAGCAGTACCGAGTAACCCACATAGCTCGGTCAGAGAATCAAGAAGCTGATGCCTTGGCTCGGCTAGCCAGTTCTTCTCTAAGCGACAAGCCAAGGACGGTGTACTGGGAAGTCCTCGGGAAGCGCAGCATCGAGGTCGGGGAAAATCTGTGGATTGACAGGTCGGAGACCTGGATGGACCCCATCAAGGAATACCTCCAGAGGGGCACCCTGCCTGTGGATCCTAAGGAAGCAGCCCGGGTACAAACGAAGTCCAAATGGTTCGCACTGCATGAAGGGGTCCTATACAAAAAGTCATTCACCCAGCCCTGGCTCAAGTGTCTTGGCCCAGACCGTGGAAGAACGGTGTTGGAAGAGCTGCATCAAGGAATATGCTCAGCCCATATGGGGGGCAGGGCTTTGTCCTTGAAGGCATTGAGGTCGGGCTACTACTGGCCAACTATGCACGCCGACGCCCTGAAATTGGTTAAAACTTGCCCGAAGTGCCAGAAGTTCTCTCCGGTTCATCATGCACCAGCAGGGGAGTTGAATCCCATCGCGACCCCCCTACCCTTCATGAGATGGGGCGTTGACATACTCGGTCCATTCACTCCAGCACCAGGTCAGCTCAAGTACCTCATTATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160930.p1 GENE.S_Transcript_160930~~S_Transcript_160930.p1 ORF type:3prime_partial len:857 (+),score=98.97,RVT_1|PF00078.23|4.6e-28,RVT_1|PF00078.23|2.6e+03,RVT_3|PF13456.2|1.5e-20,RNase_H|PF00075.20|3.1e-05 S_Transcript_160930:210-2570(+)
MEASLAELTKQVICEHADVFAHSVEDMPGIDPSVAEHRLNIKANVSPAQQKKRNMGPERSQAANEEVGKLLEAGFIRECQYPGWLSNVVMVRKANGSWRMCVDFTDLNKACPKDHHPLPRIDRLVDSTASYAMLSFLDAFSGYHQIPLHREDQENTAFIVDRGVYCYQVMPFGLKNAGATYQRMVDRMFEGQIGRNMEVYVDDIIVKSETAEQHPADLRETFQCLRRHRMKLNPKKCTFGVSSGKFLGFLISQRGIDVNPDKVQAIADMKPPRSIKEVQKLAGCVAALRRFMSKSAEKCMPFFDVLKKKAKFEWTQAAQLSFEKLKEHLRSLPRMVSPEVGETLYLYLSVSEVAVSSVLVAERDQEQKPVYFISHALCGPQLRYSDLEKFALALLLTHRKLYPYFQSNQVVVLTNQPLKKVMERLECAGRMQVWATEMSGSGCPQYEPRRAIKAQALADFIVECTRDEEYLDCPMTEWWRLFVDGSATMRGNGAGVIIIDPSGYKSEYAVRINFKASNNETEYEALLSGLGMASSAKAQKVDVFTDSLLVAGQISGEYSAKEPRMQLYLEKVKAVLSTFQQYRVTHIARSENQEADALARLASSSLSDKPRTVYWEVLGKRSIEVGENLWIDRSETWMDPIKEYLQRGTLPVDPKEAARVQTKSKWFALHEGVLYKKSFTQPWLKCLGPDRGRTVLEELHQGICSAHMGGRALSLKALRSGYYWPTMHADALKLVKTCPKCQKFSPVHHAPAGELNPIATPLPFMRWGVDILGPFTPAPGQLKYLIM

Click here to download the sequence:
Link to NCBI Protein BLAST