Transcript Information: S_Transcript_160973.p1


Annotated TAIR IDAT4G19710.2
Annotated Gene Nameaspartate kinase-homoserine dehydrogenase ii
Annotated Gene Symbol(s)AK-HSDH II, AK-HSDH
Annotation TypeOrtholog
Chromosome Positionchr4:10725229-10729536 | Forward length=916
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1101.42575034063
Replicate 2112.65029122325
Replicate 3124.56900452973
Condition 2: 8 Hour
Replicate 1104.22900922468
Replicate 2111.07769390117
Replicate 3109.09246023161
Condition 3: 24 Hour
Replicate 186.282520162631
Replicate 287.73567232503
Replicate 381.420944657127


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160973.p1 GENE.S_Transcript_160973~~S_Transcript_160973.p1 ORF type:complete len:916 (+),score=182.51,Homoserine_dh|PF00742.15|2e-55,AA_kinase|PF00696.24|1e-43,NAD_binding_3|PF03447.12|5.3e-25,ACT|PF01842.21|5.2e-09,ACT|PF01842.21|2.8e-07,ACT_7|PF13840.2|6.4e-06,ACT_7|PF13840.2|1.7e-09 S_Transcript_160973:180-2927(+)
ATGGCGGCTTCCAATGGCCTTCTTTCCAACACATTGTATCGACCTTTTTCCAAAACCTCAACCTCCTCCTCTTCTTCTTCATCATTCATTTTATTGCCTCATTCTTCTTCTTGTTCTTCTCTCCAACCCTCTCTTTTTACCAGAAAGAATTTGCTGTCTCAATCAGGGAAGCGATGGCCATGTTCTGGAATTCAGGCCTCGGCCAAAGCTACTACTATAGAGAGTTCGGCGGAAACTGTTAAGCTACCTAAAGGTGACATGTGGTCTGTTCATAAATTTGGGGGAACTTGTGTTGGAAGCTCTGACCGAATTGAGAATGTTGCCCAAATAGTTGTAAATGACAACTCAGAGAGGAAGTTGGTGGTCGTGTCAGCCATGTGCAAGGTCACTGATATGATGTACGACTTAATCCAAAAGGCACAATCACGGGATGATTCCTTCTTGACTGCCTTGGATGCTGTTTTAGAAAAGCACACTCTAACGGCAAAGGATCTGTTGGAGGGGGATGATCTTCTAAGTTTCTTATCAAGGTTGCATGATGATATAAACAATCTTAAGGCTATGCTTCGTGCAATCTACATAGCTGGTCATGCAACGGAATCATTTTCTGATTTTGTTGTTGGACATGGGGAGTTGTGGTCTGCACAGATGCTATCATATGTTATAAGAAAGAAAGGTTTTGATTGTACATGGATGGACACACGGGATGTCCTTGTGGTGAATCCAACTGGTTCAAATCAAGTTGACCCAGAATATTCGGAATCTGAAAGAAGACTCAACAAATGGTTTTCTAGTAACCCATCGAGGATCATTGTAGCAACTGGCTTCATAGCTAGTACCCCTCAAAACATTCCAACTACTCTGAAGAGGGATGGAAGTGACTTTTCTGCGGCTATAATGGGTGCTCTTTTTAGAGCTCATCAAGTTACCATCTGGACAGATGTTGATGGTGTCTACAGTGCAGATCCGAGAAAAGTGAGTGAAGCTGTGATACTGAAAACATTGTCATATCAAGAAGCTTGGGAGATGTCATACTTTGGGGCAAATGTATTGCATCCTCGGACCATCATTCCTGTTATGCGGTATGACATTCCAATTGTAATCAGAAATGTTTTCAACCTCATGGCTCCTGGGACAAAGATATGTCGTCTTTCTCCTAATGAAAATGGAGACAGCATGCAGTCTCCTGTCAAAGGATTTGCAACGATAGATAATTTGGCACTTGTAAACGTTGAGGGAACCGGTATGGCTGGTGTTCCTGGTACAGCTGGTGCCATTTTCAGTGCGGTGAAGGAGGTCGGGGCTAATGTTATCATGATCTCACAGGCTAGTAGTGAGCATTCAGTATGTTTTGCTGTGCCTGAGAAGGAAGTAGATTCAGTTGCCGAAGCTTTGCGGTCAAGATTTCGTCAAGCTTTGGATGCTGGCCGTCTTTCTCAAGTTGCCATTATCCCAAACTGCAGCATTTTGGCAACAGTTGGGCAGAAGATGGCCAGTACCCCAGGAGTTAGTGCCACTCTGTTTAATGCACTAGCAAAGGCTAATATAAATATTCGAGCCATAGCACAGGGTTGTTCGGAATACAACATTACAGTGGTTGTAAAGAGGGATGATTGTATTAAAGCCCTGAGAGCTGTTCATTCCAGGTTTTATCTCTCACAGACAACAATAGCAATGGGCATCATTGGGCCAGGATTGATTGGCGGGACACTCCTTGACCAACTCCGTGACCAGGCAGCTGTATTAAAGGAGGAGTTTAACATTGACTTGCGTGTTATGGGAATTACAAGCTCAAAGAAAATGTTTCTTTCTGACTTGGGTGTTGACCTGTCTAACTGGAGAGAGCTCCAGAGTGAGCACGGACAAGTTGCAGACTTGAATAAATTTGCCCAACATATTCATGGGAATCATTTTATCCCCAATACTGTGTTAGTAGATTGTACAGCTGACTCTTACATTGCAAGCCATTATTATGATTGGTTGCGGAAAGGAATTCATATAATTACGCCGAACAAGAAGGCAAACTCCGGGCCTCTTGATCAGTATCTAAAGTTGAGAGCTCTGCAACGACAATCCTATACTCATTACTTTTATGAGGCCACTGTTGGTGCGGGTCTTCCTATTATCAGCACTCTAAGAGGTCTTCTTGAAACGGGTGACAAAATTTTGAGCATTGAGGGTATTTTCAGTGGAACTTTGAGTTACATATTCAACAAGTTCAAGGGCAAAAGAAATTTTAGCGATGTAGTGACAGAGGCAAAAGAAGCAGGTTACACTGAGCCGGATCCTAGGGACGATCTCTCTGGAACTGATGTTGCTAGAAAGGTTATAATTTTAGCTAGGGAATGTGGATTGAACCTTGAACTTTCCGATATTCCTCCTGAGAGCCTTGTGCCTGAACCATTGCGGGCTACCGCATCAGCCAAGGAATTCATGGATCAACTTCCTAAGTTTGATCAAGACTGGGGAAAGAGACTACAAGCTGCTGAGGATGCAGGGGAGGTCCTACGTTATGTTGGAGTGGTGGATGTGGTAAATCATAAGGGACAAGTGAAGATGGGGAGTTACAAGAAGGATCACCCATTTGCTCAGCTTTCGGGATCAGATAACATCATCTTATTCACCACAGAGCGGTACAAGGAGCAACCACTGATAGTACGAGGTCCTGGTGCAGGGGCTGAAGTCACGGCTGGTGGAGTTTTCAGCGACATCTTGCGCTTGGCCTCTTACCTCGGTGCTCCTTCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160973.p1 GENE.S_Transcript_160973~~S_Transcript_160973.p1 ORF type:complete len:916 (+),score=182.51,Homoserine_dh|PF00742.15|2e-55,AA_kinase|PF00696.24|1e-43,NAD_binding_3|PF03447.12|5.3e-25,ACT|PF01842.21|5.2e-09,ACT|PF01842.21|2.8e-07,ACT_7|PF13840.2|6.4e-06,ACT_7|PF13840.2|1.7e-09 S_Transcript_160973:180-2927(+)
MAASNGLLSNTLYRPFSKTSTSSSSSSSFILLPHSSSCSSLQPSLFTRKNLLSQSGKRWPCSGIQASAKATTIESSAETVKLPKGDMWSVHKFGGTCVGSSDRIENVAQIVVNDNSERKLVVVSAMCKVTDMMYDLIQKAQSRDDSFLTALDAVLEKHTLTAKDLLEGDDLLSFLSRLHDDINNLKAMLRAIYIAGHATESFSDFVVGHGELWSAQMLSYVIRKKGFDCTWMDTRDVLVVNPTGSNQVDPEYSESERRLNKWFSSNPSRIIVATGFIASTPQNIPTTLKRDGSDFSAAIMGALFRAHQVTIWTDVDGVYSADPRKVSEAVILKTLSYQEAWEMSYFGANVLHPRTIIPVMRYDIPIVIRNVFNLMAPGTKICRLSPNENGDSMQSPVKGFATIDNLALVNVEGTGMAGVPGTAGAIFSAVKEVGANVIMISQASSEHSVCFAVPEKEVDSVAEALRSRFRQALDAGRLSQVAIIPNCSILATVGQKMASTPGVSATLFNALAKANINIRAIAQGCSEYNITVVVKRDDCIKALRAVHSRFYLSQTTIAMGIIGPGLIGGTLLDQLRDQAAVLKEEFNIDLRVMGITSSKKMFLSDLGVDLSNWRELQSEHGQVADLNKFAQHIHGNHFIPNTVLVDCTADSYIASHYYDWLRKGIHIITPNKKANSGPLDQYLKLRALQRQSYTHYFYEATVGAGLPIISTLRGLLETGDKILSIEGIFSGTLSYIFNKFKGKRNFSDVVTEAKEAGYTEPDPRDDLSGTDVARKVIILARECGLNLELSDIPPESLVPEPLRATASAKEFMDQLPKFDQDWGKRLQAAEDAGEVLRYVGVVDVVNHKGQVKMGSYKKDHPFAQLSGSDNIILFTTERYKEQPLIVRGPGAGAEVTAGGVFSDILRLASYLGAPS*

Click here to download the sequence:
Link to NCBI Protein BLAST