Transcript Information: S_Transcript_160998.p3


Annotated TAIR IDAT2G48060.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr2:19651560-19662386 | Reverse length=2462
E-Value1E-19
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2903273326148
Replicate 20.5348555044246
Replicate 31.2295157389067
Condition 2: 8 Hour
Replicate 10.51697915920322
Replicate 20.27117392290578
Replicate 30.51674782072682
Condition 3: 24 Hour
Replicate 10.79435939965797
Replicate 20.96149503657231
Replicate 30.91716525109513


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_160998.p3 GENE.S_Transcript_160998~~S_Transcript_160998.p3 ORF type:complete len:165 (+),score=12.44 S_Transcript_160998:252-746(+)
ATGTGTTTATATCCTTCTTTATGGCGGATTCGACAGATCTCCTTGTTTGCACTTTGCTATTGGAGTTTCCAGTTTGCCAGTCTGTACGCCTTTGGCTTACTTGCATATGTTGGCTACATTTTATATGCCTTCCCTTCATTGTTTCACCTGCACCGGTTGAATGGATTGCTACTTGTCTTCATTCTCTTTTGGGCCTCTAGCACATATGTCTTCAACGTGGCATTCACATATTTCCATAAAAAATTACAGAAGGACATGGAAATTTGGGAGACTATTGGCTTGTGGCATTTTTCTGTACCAGGTCTTTATCTTTTTGCGCAATTCTGTCTTGGTGTTCTGGTTGCTCTCGGCAACCTTGTCAACAGTTCCGTTTTCCTTTTCTTGTCTGATGTTGATGGACAATCTAAATCTATGCATGGTGATTCCGCTGTGGAAGAGTTAGGCGTCTTCAAATGGATGAATCTGACTTCTTTTCTATATGCCAGAGAAAGATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_160998.p3 GENE.S_Transcript_160998~~S_Transcript_160998.p3 ORF type:complete len:165 (+),score=12.44 S_Transcript_160998:252-746(+)
MCLYPSLWRIRQISLFALCYWSFQFASLYAFGLLAYVGYILYAFPSLFHLHRLNGLLLVFILFWASSTYVFNVAFTYFHKKLQKDMEIWETIGLWHFSVPGLYLFAQFCLGVLVALGNLVNSSVFLFLSDVDGQSKSMHGDSAVEELGVFKWMNLTSFLYARER*

Click here to download the sequence:
Link to NCBI Protein BLAST