Transcript Information: S_Transcript_161004.p3


Annotated TAIR IDAT2G48060.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: shoot, sperm cell; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3595 (InterPro:IPR021999); Has 533 Blast hits to 341 proteins in 95 species: Archae - 2; Bacteria - 15; Metazoa - 318; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:19651560-19662386 | Reverse length=2462
E-Value1.3E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20.42979460176977
Replicate 30.23951605303377
Condition 2: 8 Hour
Replicate 10.41542968150259
Replicate 20
Replicate 30
Condition 3: 24 Hour
Replicate 10.28369978559213
Replicate 20
Replicate 30.49133852737239


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_161004.p3 GENE.S_Transcript_161004~~S_Transcript_161004.p3 ORF type:complete len:154 (+),score=12.12,Piezo_RRas_bdg|PF12166.4|5.6e-35 S_Transcript_161004:5391-5852(+)
ATGGGGCCTTTGCACCAACATGCAGGAGGATTTGCACTACGTGCCATATTTCTCACAAAATCAATTTCTCTGGCACTTCAAGCTGTGCAAATTCGGTATGGAATCCCAAATAAAGGCACTTTGTATCAGCAATTCTTGACAAGCAGTGTGTCAAGAATAAATTACCTTGCCTTTAAAGTCTACCGTGCATTGCCTTTCCTCCATGAATTACGCTGTGTACTTGACTGGTCTTGCACGACTACCTCCCTCACTATGTATGACTGGTTGAAGCTGGAGGATATTCATGCGAGCTTTTTTCTCGTCAAGTGTGATGTGGATCTGAACAGAGCAAGTCATCATCAAGGACAGAGACAAACTAAAATGACAAAATTTTGCAATGGTATCTGCTTATTCCTTGTGCTGATCTGTGTTATATGGGCTCCTATGCTGGTAAGTGTGTTTATTGGAAACTATCTAGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_161004.p3 GENE.S_Transcript_161004~~S_Transcript_161004.p3 ORF type:complete len:154 (+),score=12.12,Piezo_RRas_bdg|PF12166.4|5.6e-35 S_Transcript_161004:5391-5852(+)
MGPLHQHAGGFALRAIFLTKSISLALQAVQIRYGIPNKGTLYQQFLTSSVSRINYLAFKVYRALPFLHELRCVLDWSCTTTSLTMYDWLKLEDIHASFFLVKCDVDLNRASHHQGQRQTKMTKFCNGICLFLVLICVIWAPMLVSVFIGNYLA*

Click here to download the sequence:
Link to NCBI Protein BLAST