Transcript Information: S_Transcript_16101.p1


Annotated TAIR IDAT3G02380.1
Annotated Gene NameCONSTANS-like 2
Annotated Gene Symbol(s)COL2, ATCOL2
Annotation TypeOrtholog
Chromosome Positionchr3:487438-488624 | Reverse length=347
E-Value3.4E-136
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1466.89093150572
Replicate 2558.62259789478
Replicate 3623.87845751655
Condition 2: 8 Hour
Replicate 127.967725006076
Replicate 223.227602412831
Replicate 315.550085547896
Condition 3: 24 Hour
Replicate 1583.12708115603
Replicate 2503.18615538087
Replicate 3631.79153854127


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16101.p1 GENE.S_Transcript_16101~~S_Transcript_16101.p1 ORF type:complete len:366 (+),score=63.36,CCT|PF06203.10|3.1e-18,zf-B_box|PF00643.20|0.00011,zf-B_box|PF00643.20|2.5e-07 S_Transcript_16101:810-1907(+)
ATGTTGAAGGCGGAATTAGGAGGAGGAAGAGATACCAACAGCTGGGCACGTCTGTGCGACACATGCCGTTCAGCACCATGCACTGTGTACTGCAGAGCTGATTCTGCCTACCTGTGCACTGGCTGCGACACCCGAATCCATGCTGCCAATCAGGTGGCATCTCGCCACGAGCGGGTGTGGGTGTGTGAAGCGTGTGAACGTGCCCCTGCTGCCTTCCTGTGCAAGGCAGATGCAGCATCACTCTGTGCTTCTTGTGATGCCGACATCCACGCGGCTAATCCGCTTGCTCGTCGCCACCAGCGGGTCCCAATCATGCCTGTTGCAGGTTCTCTTTATGGTCCATCTGGGAGGAGGGAAGGAGACTCTGAGGACGGGTTCTTGGGCCCGCAAGATGGAGATGAAGCCATTGATGAGGGAGACGAAGATGAAGCTGCTTCATGGTTGCTACTCAACCCAGGTAAGAACAATAACACCCAAAAGAACATTGGGTTTTTATTAGGAGAGGAGGTTGATCAGTACCTCGACCTCTTTGAGTACAATTCAGGTGCCGAAAACCAGTTCTGCGATCAGTATAATCAGCAGCAGGAGTTCAATGTCCCTGAGAAGAACTGTGGAGGAGACAGCGTCGTGCCAGTTCAGTGTGGCGAAGGCAAGGAGCAGCACTACCAGAACTTCTTGTTCGGGATGGAATACGAAACAAAATCTGCCTACAATTACAGCACGTCAACTAGTCACAGCGTATCTGTTTCCTCCCTAGATGTGGGTGTTGTACCAGACTCTACAATGAGCGAACTGTCATTGTCACACCCAAGGCCTCACAAGGGCACAATTGACCTCTTCTCCGGCCCTTCCCTCCAAATGCCTACGCAACTATCTCCCTTGGACAGGGAGGCTAGGGTAATGAGATACAGAGAAAAGAAGAAAACAAGGAAGTTTGAGAAGACAATCCGTTATGCTTCAAGAAAGGCATATGCAGAGACAAGACCACGTATCAAAGGACGGTTTGCAAAGAGAACAGATGTTGAAGTGGAGATGGAACAGATGTTCCCTAATTCACTTATAGCCCAAGCTGGATATGGCATAGTTCCATCATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16101.p1 GENE.S_Transcript_16101~~S_Transcript_16101.p1 ORF type:complete len:366 (+),score=63.36,CCT|PF06203.10|3.1e-18,zf-B_box|PF00643.20|0.00011,zf-B_box|PF00643.20|2.5e-07 S_Transcript_16101:810-1907(+)
MLKAELGGGRDTNSWARLCDTCRSAPCTVYCRADSAYLCTGCDTRIHAANQVASRHERVWVCEACERAPAAFLCKADAASLCASCDADIHAANPLARRHQRVPIMPVAGSLYGPSGRREGDSEDGFLGPQDGDEAIDEGDEDEAASWLLLNPGKNNNTQKNIGFLLGEEVDQYLDLFEYNSGAENQFCDQYNQQQEFNVPEKNCGGDSVVPVQCGEGKEQHYQNFLFGMEYETKSAYNYSTSTSHSVSVSSLDVGVVPDSTMSELSLSHPRPHKGTIDLFSGPSLQMPTQLSPLDREARVMRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVEMEQMFPNSLIAQAGYGIVPSF*

Click here to download the sequence:
Link to NCBI Protein BLAST