Transcript Information: S_Transcript_16105.p1


Annotated TAIR IDAT3G02380.1
Annotated Gene NameCONSTANS-like 2
Annotated Gene Symbol(s)COL2, ATCOL2
Annotation TypeHomolog
Chromosome Positionchr3:487438-488624 | Reverse length=347
E-Value2E-70
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1204.45418456345
Replicate 2230.51359653415
Replicate 3227.0043598658
Condition 2: 8 Hour
Replicate 119.300427438355
Replicate 218.787042032767
Replicate 313.599131261338
Condition 3: 24 Hour
Replicate 1434.95302142993
Replicate 2307.47461877466
Replicate 3305.65824733084


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16105.p1 GENE.S_Transcript_16105~~S_Transcript_16105.p1 ORF type:complete len:337 (+),score=59.20,CCT|PF06203.10|2.7e-18,zf-B_box|PF00643.20|9.6e-05,zf-B_box|PF00643.20|2.2e-07 S_Transcript_16105:810-1820(+)
ATGTTGAAGGCGGAATTAGGAGGAGGAAGAGATACCAACAGCTGGGCACGTCTGTGCGACACATGCCGTTCAGCACCATGCACTGTGTACTGCAGAGCTGATTCTGCCTACCTGTGCACTGGCTGCGACACCCGAATCCATGCTGCCAATCAGGTGGCATCTCGCCACGAGCGGGTGTGGGTGTGTGAAGCGTGTGAACGTGCCCCTGCTGCCTTCCTGTGCAAGGCAGATGCAGCATCACTCTGTGCTTCTTGTGATGCCGACATCCACGCGGCTAATCCGCTTGCTCGTCGCCACCAGCGGGTCCCAATCATGCCTGTTGCAGGTTCTCTTTATGGTCCATCTGGGAGGAGGGAAGGAGACTCTGAGGACGGGTTCTTGGGCCCGCAAGATGGAGATGAAGCCATTGATGAGGGAGACGAAGATGAAGCTGCTTCATGGTTGCTACTCAACCCAGGTGCCGAAAACCAGTTCTGCGATCAGTATAATCAGCAGCAGGAGTTCAATGTCCCTGAGAAGAACTGTGGAGGAGACAGCGTCGTGCCAGTTCAGTGTGGCGAAGGCAAGGAGCAGCACTACCAGAACTTCTTGTTCGGGATGGAATACGAAACAAAATCTGCCTACAATTACAGCACGTCAACTAGTCACAGCGTATCTGTTTCCTCCCTAGATGTGGGTGTTGTACCAGACTCTACAATGAGCGAACTGTCATTGTCACACCCAAGGCCTCACAAGGGCACAATTGACCTCTTCTCCGGCCCTTCCCTCCAAATGCCTACGCAACTATCTCCCTTGGACAGGGAGGCTAGGGTAATGAGATACAGAGAAAAGAAGAAAACAAGGAAGTTTGAGAAGACAATCCGTTATGCTTCAAGAAAGGCATATGCAGAGACAAGACCACGTATCAAAGGACGGTTTGCAAAGAGAACAGATGTTGAAGTGGAGATGGAACAGATGTTCCCTAATTCACTTATAGCCCAAGCTGGATATGGCATAGTTCCATCATTCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16105.p1 GENE.S_Transcript_16105~~S_Transcript_16105.p1 ORF type:complete len:337 (+),score=59.20,CCT|PF06203.10|2.7e-18,zf-B_box|PF00643.20|9.6e-05,zf-B_box|PF00643.20|2.2e-07 S_Transcript_16105:810-1820(+)
MLKAELGGGRDTNSWARLCDTCRSAPCTVYCRADSAYLCTGCDTRIHAANQVASRHERVWVCEACERAPAAFLCKADAASLCASCDADIHAANPLARRHQRVPIMPVAGSLYGPSGRREGDSEDGFLGPQDGDEAIDEGDEDEAASWLLLNPGAENQFCDQYNQQQEFNVPEKNCGGDSVVPVQCGEGKEQHYQNFLFGMEYETKSAYNYSTSTSHSVSVSSLDVGVVPDSTMSELSLSHPRPHKGTIDLFSGPSLQMPTQLSPLDREARVMRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVEMEQMFPNSLIAQAGYGIVPSF*

Click here to download the sequence:
Link to NCBI Protein BLAST