Transcript Information: S_Transcript_161180.p1


Annotated TAIR IDAT4G33480.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3727 (InterPro:IPR022203); Has 348 Blast hits to 348 proteins in 78 species: Archae - 0; Bacteria - 101; Metazoa - 0; Fungi - 0; Plants - 183; Viruses - 0; Other Eukaryotes - 64 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:16105804-16108497 | Reverse length=336
E-Value4.4E-137
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 128.15093849249
Replicate 233.48222334859
Replicate 333.502759267445
Condition 2: 8 Hour
Replicate 176.996446949046
Replicate 280.549897238011
Replicate 381.353699778811
Condition 3: 24 Hour
Replicate 118.33213840668
Replicate 222.265201825005
Replicate 325.222044405116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_161180.p1 GENE.S_Transcript_161180~~S_Transcript_161180.p1 ORF type:5prime_partial len:398 (+),score=78.83,DUF3727|PF12527.4|3.4e-22 S_Transcript_161180:3-1196(+)
ATTGCAGGAAAAAATCTACTACCTAGTGTCGTAACTTGCCACTACCCAGTACCCACTATACTGTCAACAGGCCGTTATACCGCTGCAAAATCTTCTAATCCCTTCCATTCCACCATAACCAAAACACAAACACAAATCTCAAATCTTTGCAAAACCCCATTTCAATTCACACTCAAATTTCACAATCCAATACTCAAAAAAACAAATATGGCCTTATCCCTTTCCTCAATATCTCATACACCCCCACTTCATCACAATCACCCCTCTAAAACCCTCCAACTATCTCCCTCCACAATCTCCATAACCCCCTTTAAACCTTTCCCTTTGACCCACCAAAAATGGGGCCCTGTTGTATGCTTAGCTGCTAAGCAACAAAGTGGGTCAGTCAAACCCAACAAGAAGAGAAGAAAAAAGGGTGGTTCTGGGCCTAAAGACTTGAGCTTGGAGGGTTTTGAGATTGTAGAAGAGATTGAAAGAGAAAGAGAGAGGTCTAGTAGTAGTAGTAGTAGTAAGTCTAAGAGGTCTGAAGCTTATATACCTTTGCCATTGCCTAAGCCACCTGCTGGGTTTGTGGTTGATGAACAAGGCCGTGTTCTTATGGCTGCCTCCAAGAGAATTGCTACTATTGTTGATCCTACCAATAACCTTCCACTGGAGTGCATGATAAGGAGAGTATTTACAAACTCTAAAGGGGATGACTGTATGTTGCTGTGCCCAGTTGATACGCCTGTTCAGATTTTGAAAAGCACGAATATCGAAGGATGGTCAGCTGTTAATGATGATGAAGTTGAATCTCTCCTTCCCACTGCAGCTTATGCCCTTGCTAAGATACATATGCATTTGGTACATAGTGGGTTTTGTTATACAGCTCGTGGAGGATTTTGCTACTCAGAAGATAACATATTTGAATTCCGATCAGATGATGGACAAGATGTAGATGGTGTACCAACAGAAGGTGTTGAAATTACTTGCTTCCACATGGATGGAGCTCATTATATGATTTACACGCCATCTGATCCACTTCTCTTTGTTGCTGTTAAGGACAATGACGGCCAGTTGCATATTGCTGATGATGATCTCTTGGATGACCCTGCCGTTGTAAGTGCAATAGATGAGGAGACAGAATTTAACGCATTGGTGGAGGAAGAGGCTGCTCTTTTGGAATCAGTTTTTGGTACAGATACAGACAGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_161180.p1 GENE.S_Transcript_161180~~S_Transcript_161180.p1 ORF type:5prime_partial len:398 (+),score=78.83,DUF3727|PF12527.4|3.4e-22 S_Transcript_161180:3-1196(+)
IAGKNLLPSVVTCHYPVPTILSTGRYTAAKSSNPFHSTITKTQTQISNLCKTPFQFTLKFHNPILKKTNMALSLSSISHTPPLHHNHPSKTLQLSPSTISITPFKPFPLTHQKWGPVVCLAAKQQSGSVKPNKKRRKKGGSGPKDLSLEGFEIVEEIERERERSSSSSSSKSKRSEAYIPLPLPKPPAGFVVDEQGRVLMAASKRIATIVDPTNNLPLECMIRRVFTNSKGDDCMLLCPVDTPVQILKSTNIEGWSAVNDDEVESLLPTAAYALAKIHMHLVHSGFCYTARGGFCYSEDNIFEFRSDDGQDVDGVPTEGVEITCFHMDGAHYMIYTPSDPLLFVAVKDNDGQLHIADDDLLDDPAVVSAIDEETEFNALVEEEAALLESVFGTDTDR*

Click here to download the sequence:
Link to NCBI Protein BLAST