Transcript Information: S_Transcript_161193.p3


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.071664479269
Replicate 20.29614482627537
Replicate 31.4853210268672
Condition 2: 8 Hour
Replicate 10.57249369978881
Replicate 20.9008798109957
Replicate 31.0014156592944
Condition 3: 24 Hour
Replicate 11.3194896068144
Replicate 21.2168489436965
Replicate 32.3698565212861


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_161193.p3 GENE.S_Transcript_161193~~S_Transcript_161193.p3 ORF type:complete len:149 (+),score=25.88,RVT_1|PF00078.23|6.7e-22 S_Transcript_161193:3030-3476(+)
ATGTTAATTGAGTTGGGATTCCCTGCTAAATGTATTGGATGGATAATGGCTTGTGTCACTTCTGTTAGCTATGTTATTAATATTAATGGGGAACTACAAAAACCTTTTGAGGTTAGGAGGGGGCTACGACAAGGTGATCCTATCTCTCCTTTGTTATTTGTTATTGCTATGGAGTATTTATCTAGGTGCATGGTTGGCTTGAAAGAGGATAATACTTTCAAATTTCATCCTAAGTGCAAGAAGATTGGCTTAACCCATTTATGTTTTGCTGATGATCTGATGATTTTTGCTAAGGGAGAAGATCAATTAGTTACTCGAATTCATGATATGTTCCTTAAATTCTCCAAAGTCTCAGGGTTGCAAGCTAATTTGGGTAAGAGTTCTATTTTCTTTGGAGGAGTTGGTCAGCAAGCACAGGAGGAAATTTTAGCTAAAGTGGGATTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_161193.p3 GENE.S_Transcript_161193~~S_Transcript_161193.p3 ORF type:complete len:149 (+),score=25.88,RVT_1|PF00078.23|6.7e-22 S_Transcript_161193:3030-3476(+)
MLIELGFPAKCIGWIMACVTSVSYVININGELQKPFEVRRGLRQGDPISPLLFVIAMEYLSRCMVGLKEDNTFKFHPKCKKIGLTHLCFADDLMIFAKGEDQLVTRIHDMFLKFSKVSGLQANLGKSSIFFGGVGQQAQEEILAKVGF*

Click here to download the sequence:
Link to NCBI Protein BLAST