Transcript Information: S_Transcript_161193.p6


Annotated TAIR IDAT4G04650.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:2353989-2355213 | Reverse length=332
E-Value2E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.587375120087
Replicate 21.6853519800879
Replicate 32.177267454314
Condition 2: 8 Hour
Replicate 11.9252088480745
Replicate 21.8643207199772
Replicate 32.0723740727065
Condition 3: 24 Hour
Replicate 11.3653052181621
Replicate 22.3608137058695
Replicate 31.2260716030265


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_161193.p6 GENE.S_Transcript_161193~~S_Transcript_161193.p6 ORF type:complete len:144 (+),score=26.46,zf-RVT|PF13966.2|3.6e-11,zf-RVT|PF13966.2|3.1e+03 S_Transcript_161193:4151-4582(+)
ATGTTGTTGCAGAGACATCTTACTAAGGATAGGATGGCAAGTTGGGGCATTCAATGTGACCCTATTTGCATTCTGTGCAGGAAGGAGAATGAAAGCCATGAACACATATTGTTACAGTGTGATTTTTCTGATAGAGTATGGCAAGGTGTCTTGGCTAGTTTGCATTTACAGAAGAAAGGTAGTAGGAAGCCTCGGAGGTGGCAGCAAGGATTGCATTGGATGAGCTCGGATAGCAAAGGTAAAAGAGTAGAAGCTATTTTATTTATAGCTGTTGTGGCTGAAATATGGTATGCTTGTTGGATAGAAAGAAATCAAAGGGTATTTGCCAAGGTGGAGAAGACTGTTGATATGCTTATCAAGGAAGTTGTGTATGCTGTTTGTTTGAGAGGAAATAGTACACATTGCATCAAAGCTTACTTAGATAATTTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_161193.p6 GENE.S_Transcript_161193~~S_Transcript_161193.p6 ORF type:complete len:144 (+),score=26.46,zf-RVT|PF13966.2|3.6e-11,zf-RVT|PF13966.2|3.1e+03 S_Transcript_161193:4151-4582(+)
MLLQRHLTKDRMASWGIQCDPICILCRKENESHEHILLQCDFSDRVWQGVLASLHLQKKGSRKPRRWQQGLHWMSSDSKGKRVEAILFIAVVAEIWYACWIERNQRVFAKVEKTVDMLIKEVVYAVCLRGNSTHCIKAYLDNL*

Click here to download the sequence:
Link to NCBI Protein BLAST