Transcript Information: S_Transcript_161214.p1


Annotated TAIR IDAT3G18660.2
Annotated Gene Nameplant glycogenin-like starch initiation protein 1
Annotated Gene Symbol(s)PGSIP1, GUX1
Annotation TypeOrtholog
Chromosome Positionchr3:6419211-6421959 | Reverse length=659
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4028558790638
Replicate 21.3340291360358
Replicate 31.8585703029985
Condition 2: 8 Hour
Replicate 11.5870057910425
Replicate 21.8383069424892
Replicate 32.5116347565559
Condition 3: 24 Hour
Replicate 12.2352904036887
Replicate 21.5109207717565
Replicate 33.1283155851307


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_161214.p1 GENE.S_Transcript_161214~~S_Transcript_161214.p1 ORF type:complete len:645 (+),score=82.50,Glyco_transf_8|PF01501.16|3.5e+02,Glyco_transf_8|PF01501.16|3.8e-11 S_Transcript_161214:239-2173(+)
ATGGGTTCTTTTTCCAGTCCAAATGAGACTAGACAAAGATCTTATGTATCAATTGAAGAAATCTACAAAAGAAAGTTGCAGAGAAGCAAAGTTAAAGATGCAGAGAAACCAGCTCACATATCCAGCCAAGATAATAAGGGTGCAAAAAGCAAGTTTTCACTCTTGAAACTTGTCCTTCTCATCATTGTTTCTGCCGCTTTTATCACCTTATTATTCCTTCACTCCCCCGTTATCTGTAGTCACCACCATTTCTCTTCCCACTATACATCTCGGCCAAATATAATGAAAAGTTGGATATGGGGCAATACTGACCCAAGATACATATCAAAGTTAAAAATAAACTGGGATGAAATCTCAAAAGTGCTTGACAATTTAAAGGAGAAAGAGTACCATGCAATTGGCCTCTTGAACTTGAATAAAGATGAAACCAAGTTATGGAACCAGATGATTCCTGATGCCGAGCACACTGTACTGCACCTAGACTCTGCCGAAGAAAACATCACTTGGGAGTCCTTATACCCTGAATGGATCGACGAGGAGGAAGAAGAAGATGTACCGGTTTGCCCATCTTTGCCAAAGCTCGAACCACCAAGAAAAAGGCTCGACTTAATCATCGTTAAGCTGCCTTGTCAGACCGATAAGGCAAACTGGTCAAGGGATGTGGCTCGGTTGCACCTGCAGCTCGCAGCTGCAGGACTCGCAACCTCAGCCAAGGGGAATTACCCTGTTCACTTGCTTTTCATTACTAACTGTTTTCCGGCACCAAACTTGTTCCCTTGTAAGGAGCTTGTAAAGCATGAAGGAAATGCATGGTTATATAAGCCGAACTTGAATTTATTAAGAGAGAAACTCCAGCTCCCTGTAGGCTCTTGTAAACTTGCCCTACCTCTCAAGGACAAAGATAGATCATACAGGGGAAATCCAAGAAGGGAGGCATATGCAACCATCCTGCACTCAGCTCATGTCTATGTATGTGGAGCCATAGCAGCAGCTCAGAGTATTCGAATGGTGGGGTCCACTCGGGACCTGGTAATCCTAGTCGATGAGACGATTAGCAGCTACCATAGGAGTGGCCTTGAAGCAGCAGGGTGGAAAATCCGAACCATTCAGAGAATAAGGAACCCAAAGGCAGAGAAAGATGCCTATAATGAATGGAATTACAGCAAGTTCCGGTTATGGCAGTTAACTGACTACGACAAGATCATATTCATTGATGCTGACCTCCTCATCCTAAGGAACATCGATTTCCTCTTCAGCATGCCAGAGATCTCAGCCACAGGAAACAATGCAACTCTCTTCAACTCCGGAGTTATGGTCATTGAGCCCTCAAATTGCACGTTTCAGCTTCTAATGGATCACATCAATGAAATAGAGTCATACAATGGAGGTGACCAAGGATACCTTAATGAAATATTCACATGGTGGCATAGAATCCCAAGGCATATGAACTTCTTAAAGCATTTTTGGGTCGGCGATGAGGAAGAGAAGAAGCAAATGAAGACTAGGCTATTTGGGGCTGAGCCTCCTGTACTATATGTCCTGCATTACTTAGGAATCAAGCCGTGGTTATGCTACAGGGACTATGACTGTAATTGGAACGTCGATTTCTTACAGGAGTTTGCGAGTGATGTTGCACATGCTCGGTGGTGGAGAGTCCACGATGCCATGCCAGAACAGTTGCAACCGTTCTGTCTGCTGAGATCGAAGCAGAAGGCACAGATAGAGTGGGACAGGAGGCAGGCAGAGAAGGCAAATTACAGTGATGAGCATTGGAAAATCAGGGTTCAGGATAAGAGGATGAAGAAGTGTATTGACAAGTTGTGTAACTGGAAGAGTATGTTGAGGCATTGGGGTGAGACGAATTGGACCAACGATGAATCCTACACTCCTTCTCCACCTTCGATTAAGGTCACTTCTCTAAATTCTTTACAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_161214.p1 GENE.S_Transcript_161214~~S_Transcript_161214.p1 ORF type:complete len:645 (+),score=82.50,Glyco_transf_8|PF01501.16|3.5e+02,Glyco_transf_8|PF01501.16|3.8e-11 S_Transcript_161214:239-2173(+)
MGSFSSPNETRQRSYVSIEEIYKRKLQRSKVKDAEKPAHISSQDNKGAKSKFSLLKLVLLIIVSAAFITLLFLHSPVICSHHHFSSHYTSRPNIMKSWIWGNTDPRYISKLKINWDEISKVLDNLKEKEYHAIGLLNLNKDETKLWNQMIPDAEHTVLHLDSAEENITWESLYPEWIDEEEEEDVPVCPSLPKLEPPRKRLDLIIVKLPCQTDKANWSRDVARLHLQLAAAGLATSAKGNYPVHLLFITNCFPAPNLFPCKELVKHEGNAWLYKPNLNLLREKLQLPVGSCKLALPLKDKDRSYRGNPRREAYATILHSAHVYVCGAIAAAQSIRMVGSTRDLVILVDETISSYHRSGLEAAGWKIRTIQRIRNPKAEKDAYNEWNYSKFRLWQLTDYDKIIFIDADLLILRNIDFLFSMPEISATGNNATLFNSGVMVIEPSNCTFQLLMDHINEIESYNGGDQGYLNEIFTWWHRIPRHMNFLKHFWVGDEEEKKQMKTRLFGAEPPVLYVLHYLGIKPWLCYRDYDCNWNVDFLQEFASDVAHARWWRVHDAMPEQLQPFCLLRSKQKAQIEWDRRQAEKANYSDEHWKIRVQDKRMKKCIDKLCNWKSMLRHWGETNWTNDESYTPSPPSIKVTSLNSLQ*

Click here to download the sequence:
Link to NCBI Protein BLAST