Transcript Information: S_Transcript_161486.p1


Annotated TAIR IDAT5G46920.1
Annotated Gene NameIntron maturase, type II family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:19053668-19055875 | Forward length=735
E-Value2.7E-50
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.6129202140979
Replicate 25.7363252849538
Replicate 35.2869176772988
Condition 2: 8 Hour
Replicate 14.8337551385502
Replicate 24.9218067007399
Replicate 37.3894938363935
Condition 3: 24 Hour
Replicate 14.8058743679307
Replicate 24.2305781609182
Replicate 35.7169967318263


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_161486.p1 GENE.S_Transcript_161486~~S_Transcript_161486.p1 ORF type:3prime_partial len:150 (-),score=17.01 S_Transcript_161486:2-448(-)
ATGCATAGAAATCTTGCTAGAATGGGTTACAAGTTCCTTAGTAGCAGTAGTGGTAACTCATTTTGTAAAACCCTTAAAACCCCATCATTTTTATGCACCCATTTGACTCACTGTAGCCCTAGGTCTAATGGGTTCGGTTCGGTTCGAGTTTTCTCGGTTTACAACAACAACTGGCGAGCACCCGACCCAGATGACCCTTTAAGCTTAATGAAGGAAGATGGGGTTGCAGTTTGTTCACATATGTGGATTGAGAATTTTAGGGACCCTGAAAAGACTGTCACCAATTTAACTAGTTATCTTAGGAAGTTTGAATTGTGGGTTTTGGCTTACCAGAAGGTTTATGCTGATGATACTGGTTCTTATTTACCTCGTAATTCGATACAAAGGTCGGCTTTGGAGGATTTGTTGGCTCTTAGGAACGCGGTTCTTGATGATCGGTTTAAGTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_161486.p1 GENE.S_Transcript_161486~~S_Transcript_161486.p1 ORF type:3prime_partial len:150 (-),score=17.01 S_Transcript_161486:2-448(-)
MHRNLARMGYKFLSSSSGNSFCKTLKTPSFLCTHLTHCSPRSNGFGSVRVFSVYNNNWRAPDPDDPLSLMKEDGVAVCSHMWIENFRDPEKTVTNLTSYLRKFELWVLAYQKVYADDTGSYLPRNSIQRSALEDLLALRNAVLDDRFKW

Click here to download the sequence:
Link to NCBI Protein BLAST