Transcript Information: S_Transcript_161563.p1


Annotated TAIR IDAT1G20890.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G76480.2); Has 33 Blast hits to 33 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 0; Plants - 31; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:7266088-7267060 | Reverse length=197
E-Value8E-38
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.565470660893
Replicate 21.6971376582704
Replicate 31.2517694174389
Condition 2: 8 Hour
Replicate 11.2544347245372
Replicate 21.7209114338251
Replicate 31.6396805849986
Condition 3: 24 Hour
Replicate 12.0757581597397
Replicate 21.7433701212575
Replicate 31.5977765686499


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_161563.p1 GENE.S_Transcript_161563~~S_Transcript_161563.p1 ORF type:internal len:221 (+),score=29.67 S_Transcript_161563:1-660(+)
CTGAAATCTATCTCTTTCATTTCTATAAATCTGCAATTTTTTTTTGTATTGTATTTCCATGTTCATTGCTATACTGATTGGCTTATGAAAACAGCTTTTGCAGAGGTGCCCATCTCAGGGAAAGAGGTTAATTCAGTTGGGTTTCCATCAGAAATCAATAAGTTTCTAAAAGGGCAAAGCTTGATTATTTATAAGGTGTTCGAATCAATTCAAATGTTGTTAGCATGTATGCAAAAATTATCCCTTCCATTCAAAGCTCTTGGACTGGTTCTGCTGTGCTTAACTTTCAGTTGTGCAAATGGCATTCACAGCAAGGTCTTGAATGTTGGGGAGGAGTTATTTAAGGAAACTTTGCCTTTGCGGATGGGATCCCGCTATTATCAGCTCCAAGGTTTGAAACCCTATACTTGGTATGAAGTAAAGATATCATACCCTGCTTCTACACCTGCCATTTTTTCCTTGCTATTGAAGAGAGGTAATTCTGACGTTGGGGTGAACCGGCTAAGAAAATTGCTCGATACTGACAAATTGATATTCAAGGCAGAGAATCTTGATGAGATGAACAATCAGGGTGGAATGTATGTTTTAATAACTGTGGAACCTGAGGGAGTTGTTGCAATACCTGGAGTCCAAGAAAGAGAGAGTATCTTGTTCAATATA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_161563.p1 GENE.S_Transcript_161563~~S_Transcript_161563.p1 ORF type:internal len:221 (+),score=29.67 S_Transcript_161563:1-660(+)
LKSISFISINLQFFFVLYFHVHCYTDWLMKTAFAEVPISGKEVNSVGFPSEINKFLKGQSLIIYKVFESIQMLLACMQKLSLPFKALGLVLLCLTFSCANGIHSKVLNVGEELFKETLPLRMGSRYYQLQGLKPYTWYEVKISYPASTPAIFSLLLKRGNSDVGVNRLRKLLDTDKLIFKAENLDEMNNQGGMYVLITVEPEGVVAIPGVQERESILFNI

Click here to download the sequence:
Link to NCBI Protein BLAST