Transcript Information: S_Transcript_161589.p1


Annotated TAIR IDAT5G58450.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23626826-23632071 | Forward length=1065
E-Value2.9E-135
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1741029956697
Replicate 22.190056316371
Replicate 32.9155796014516
Condition 2: 8 Hour
Replicate 12.7440759599252
Replicate 22.3852338623238
Replicate 32.2726455167076
Condition 3: 24 Hour
Replicate 12.7306104363243
Replicate 21.4164882235217
Replicate 32.2254745063338


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_161589.p1 GENE.S_Transcript_161589~~S_Transcript_161589.p1 ORF type:5prime_partial len:272 (-),score=37.86,TPR_19|PF14559.2|0.0064,TPR_19|PF14559.2|5.2,TPR_19|PF14559.2|10,ANAPC3|PF12895.3|0.0014,ANAPC3|PF12895.3|0.36,TPR_16|PF13432.2|0.0046,TPR_16|PF13432.2|5.4e+03,TPR_16|PF13432.2|24 S_Transcript_161589:193-1008(-)
GAAGACTACTCGCTCGCAACAGCGATGTCGAATTCACTGGCCGGAAAGTTTGGGTATGCCGGAGGCATGCCGGAGCGAAAAGTCCGGCCGATTTGGGACGCTATTGATTCTCGCCAGTACAAGAACGCTCTTAAGCTCTCTTCTGCTCTTCTCACTAAGTACCCTAATCTTCCTTACGCCATGGCACTAAAAGCTCTTATTTTGGAAAGAATGGGGAAACCTGAAGAAGCACTATCCATCTGCCTCGAAGCAAAAGAGCTGTTGCATAAAAATGTTACTCTGTTGATGGATGATCTTACACTCAGCACCTTGCAGATTGTGTTTCAAAGACTTGACCGCTTGGATTTGGCGACAAGCTTGTATGATTATGCCTGTGGAAAAATTCCAAATAATCTGGAGTTAATGATGGGGCTTTTCAATTGTTATGTTCGTGAATATGCATATGTGAAACAGCAACAGACAGCTATTAAAATGTACAAGTTTGTTGGTGAAGAAAGGTTCTTGCTGTGGGCAGTTTGTAGTATACAGCTTCAGGTTAGTTGTGGCCAAGGAGGAGAAAAGTTGTTAGGCTTAGCAGAAGGTTTACTTAAAAAGCACATCGGTTCCCACAGTCTGCATGAACCAGAAGCCCTTATGGTATACATATCTGTGCTGGAACAACAAGGCAAATATGGTGATGCACTAGAGATTCTATCTGGAAAATTGGGGTCACTTATCCTGATTGATGTTGAGCGGCTTCGCTTGCAGGTATTTTCTGAACTTTTATTTCTTGCATTTTACTGTCACGTACAGGGAATCAATCTATTAAGCAACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_161589.p1 GENE.S_Transcript_161589~~S_Transcript_161589.p1 ORF type:5prime_partial len:272 (-),score=37.86,TPR_19|PF14559.2|0.0064,TPR_19|PF14559.2|5.2,TPR_19|PF14559.2|10,ANAPC3|PF12895.3|0.0014,ANAPC3|PF12895.3|0.36,TPR_16|PF13432.2|0.0046,TPR_16|PF13432.2|5.4e+03,TPR_16|PF13432.2|24 S_Transcript_161589:193-1008(-)
EDYSLATAMSNSLAGKFGYAGGMPERKVRPIWDAIDSRQYKNALKLSSALLTKYPNLPYAMALKALILERMGKPEEALSICLEAKELLHKNVTLLMDDLTLSTLQIVFQRLDRLDLATSLYDYACGKIPNNLELMMGLFNCYVREYAYVKQQQTAIKMYKFVGEERFLLWAVCSIQLQVSCGQGGEKLLGLAEGLLKKHIGSHSLHEPEALMVYISVLEQQGKYGDALEILSGKLGSLILIDVERLRLQVFSELLFLAFYCHVQGINLLSN*

Click here to download the sequence:
Link to NCBI Protein BLAST