Transcript Information: S_Transcript_161614.p1


Annotated TAIR IDAT1G03560.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:890428-892410 | Reverse length=660
E-Value3.6E-305
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.2922853407068
Replicate 21.7409181441438
Replicate 31.7071424902878
Condition 2: 8 Hour
Replicate 12.6535387041046
Replicate 22.9195432215728
Replicate 32.9758087703464
Condition 3: 24 Hour
Replicate 11.7237237352214
Replicate 21.6163871685711
Replicate 32.0667532592963


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_161614.p1 GENE.S_Transcript_161614~~S_Transcript_161614.p1 ORF type:complete len:659 (+),score=129.40,PPR_2|PF13041.2|3.2e+03,PPR_2|PF13041.2|5.7e-09,PPR_2|PF13041.2|7.8e-06,PPR_2|PF13041.2|6.6e-17,PPR_2|PF13041.2|6.8e-09,PPR_2|PF13041.2|9.3e-10,PPR_2|PF13041.2|4.9e-14,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|2.8e-12,PPR_2|PF13041.2|1.2e-15,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|0.089,PPR_2|PF13041.2|34,PPR_1|PF12854.3|50,PPR_1|PF12854.3|0.00064,PPR_1|PF12854.3|4.6e-12,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.00074,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|1.3e-08,PPR_1|PF12854.3|2.5e-06,PPR_1|PF12854.3|4e-09,PPR_1|PF12854.3|7.5e-07,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.51,PPR|PF01535.16|23,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.014,PPR|PF01535.16|8.6e-09,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.00049,PPR|PF01535.16|5.5e-05,PPR|PF01535.16|3.7e-06,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|1.8e-09,PPR|PF01535.16|1.9e-06,PPR|PF01535.16|65,PPR|PF01535.16|0.49,PPR|PF01535.16|0.35,PPR_3|PF13812.2|9.7e+03,PPR_3|PF13812.2|0.42,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.00083,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|1.3e-06,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|3.4e-06,PPR_3|PF13812.2|1e-05,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|5,PPR_3|PF13812.2|0.5 S_Transcript_161614:103-2079(+)
ATGAGAAAAACCCTTCTACAAAGATCCCACCCTCTATCCTCCACAATCTTCTTAAAATCCCTCAACAATGACGAATCCTACCATTTTCTCTCAATTCCCACCTTTAAAACTCATTACCATCTTCCATTCCCCCAAACAACCCTTAAACTCAACTGGGTTTCTTCCATTACTACTTCTTCACTTCCCCCACCAGAATGGCTTGAACCCTTCACTGACTTATCCGACGTCGTTTCTCATCCCAATCACCAAAAGCTTCAACCTTCTGTCTGGGTTTCTCGTATCCTTGATCTTCTCCATGATTCACCTAATTTGGAGGCCAATTTGAATGATTTTTGCTCGAAGTTTTTGATTAAATTAACTCCCAATTTTGTTTCTTTTGTTTTGAGCTCAGCCCATTTGAAACCAGATGTTGCCTTTAGGTTCTTTTGTTGGGCTGGTAAGCAAAACAAGTATAAGCATAAATTGGAATGTTATGTTTCTTTGATTGATGTTTTGGGTTTTTCTAGTGATGTGGGTAGGGTTAAGATTGTGTTTGAGCAATTTAAGAAAATGGGGTTTGTTTTGAATGTTAATTGTTCTAATTCTTTGATTAAGAGCTTTGGTAATTTGGGTATGGTTGAGGAGTTGTTATGGGTTTGGAGGAGAATGAACGAGAATGGTATTGAACCTAGTTTGTATACTTATAATTTTTTGATGAATGGGTTGGTGAACTCTATGTTTATTGAATCTGCTGAGCAGGTTTTTGAGGTTATGGAAAATGGGAAAACTCGGCCTGATATCATTACCTATAATACTTTGATTAAAGGGTATTGTAAGGCTGGGAAGATGGTGAAGGCAATGAAGAAGTTTAAGGATATGGAGATTCGAAATGTCGAGCCAGATAAGATTACTTACATGACTTTGATACAAGCATGCTATGGAGAGAATGATTTTGATGCCTGTTTGTCGCTTTATCATGAGATGGTAGAAAAGGGATTGGAAATCCCGTCTCATGCATATAGTTTGGTGATCGGTGGGCTTTGCAAGGATGGGAAGTATGCGCAAGCTTGTGTGGTTTTTGAAGACATGTGTAGGCGGAGGTGCAAGGCTAATGTAGCAATATATACGGCTTTAATTGATTGCCGGGTCAAAAGTGGAAATGTGGAGGCTGCAATTAGTTTGTTTGAGAGGATGAAGAATGAGGGTCTTGCACCCGATGAAGTTACATATGGGGCCATTATCAATGGTTTGAGCAAGAATGGGAGATTGGATGAAGCCATTGATTATTTCAAGGTATGTAGAGATGATGGGGTTAATGTTAATTCGACAATATATTGTTCTCTAATTGATGGCCTAGCGAAGGGAGGGAGAGTTGGGGAAGCGGAAACATTTTTTGAAGAGATGGGAAAGAATGGTTGCACACATGATTCGTATTGCTACAATGTCATGATTGATGCTCTTGCCAAATGTGGGAAAATAGACGAAGCTTTAGCCCTCTTTAATGAGATGGATGCTGAGGGATGTGATCAGACAGTCTATACATACACCATACTCATAGATGGATTGTTTAAGAAACATAAAAATGAAGAGGCATTGAAGTTGTGGAATATGATGATTGATAAGGGTATTGCACCGACTTCATCTTCTTTCAGAGTTCTCTCAATTGGACTTTGTCTTTCGGGTAAGGTTGCAAGGGCTTGCAAGATTTTGGATGAGCTAGCACCCATGGGAGTTATCCCAGAAAATGCTTTTGAAGATATGATCAATGCATTGTGTAAAGTGGGGCGCATTGAACAGGCATGCAAATTGGCTGATGGAGTTGTTGATAGGGGCAGAGAGATACCTGGAAGAGTTCGTACTATCCTGATCAATTCCCTGAGAAAATCAGGAAATGTTGATTTGGCCATGAAACTGTTGCATAGCAAAATTGGAATTGGCTATGATAGAATGGGAAGCATTAAAAGGCGTGTGAAGTTCAAAAGTCTCCTTGAGAGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_161614.p1 GENE.S_Transcript_161614~~S_Transcript_161614.p1 ORF type:complete len:659 (+),score=129.40,PPR_2|PF13041.2|3.2e+03,PPR_2|PF13041.2|5.7e-09,PPR_2|PF13041.2|7.8e-06,PPR_2|PF13041.2|6.6e-17,PPR_2|PF13041.2|6.8e-09,PPR_2|PF13041.2|9.3e-10,PPR_2|PF13041.2|4.9e-14,PPR_2|PF13041.2|1.8e-08,PPR_2|PF13041.2|2.8e-12,PPR_2|PF13041.2|1.2e-15,PPR_2|PF13041.2|1.1e-11,PPR_2|PF13041.2|1.4e+02,PPR_2|PF13041.2|0.089,PPR_2|PF13041.2|34,PPR_1|PF12854.3|50,PPR_1|PF12854.3|0.00064,PPR_1|PF12854.3|4.6e-12,PPR_1|PF12854.3|1.8,PPR_1|PF12854.3|0.00074,PPR_1|PF12854.3|0.00015,PPR_1|PF12854.3|1.3e-08,PPR_1|PF12854.3|2.5e-06,PPR_1|PF12854.3|4e-09,PPR_1|PF12854.3|7.5e-07,PPR_1|PF12854.3|0.014,PPR_1|PF12854.3|0.012,PPR_1|PF12854.3|0.51,PPR|PF01535.16|23,PPR|PF01535.16|0.0014,PPR|PF01535.16|0.014,PPR|PF01535.16|8.6e-09,PPR|PF01535.16|0.0001,PPR|PF01535.16|0.00049,PPR|PF01535.16|5.5e-05,PPR|PF01535.16|3.7e-06,PPR|PF01535.16|1.2e-06,PPR|PF01535.16|1.8e-09,PPR|PF01535.16|1.9e-06,PPR|PF01535.16|65,PPR|PF01535.16|0.49,PPR|PF01535.16|0.35,PPR_3|PF13812.2|9.7e+03,PPR_3|PF13812.2|0.42,PPR_3|PF13812.2|1.8,PPR_3|PF13812.2|0.00083,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|1.3e-06,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|0.14,PPR_3|PF13812.2|3.4e-06,PPR_3|PF13812.2|1e-05,PPR_3|PF13812.2|6.9e+02,PPR_3|PF13812.2|5,PPR_3|PF13812.2|0.5 S_Transcript_161614:103-2079(+)
MRKTLLQRSHPLSSTIFLKSLNNDESYHFLSIPTFKTHYHLPFPQTTLKLNWVSSITTSSLPPPEWLEPFTDLSDVVSHPNHQKLQPSVWVSRILDLLHDSPNLEANLNDFCSKFLIKLTPNFVSFVLSSAHLKPDVAFRFFCWAGKQNKYKHKLECYVSLIDVLGFSSDVGRVKIVFEQFKKMGFVLNVNCSNSLIKSFGNLGMVEELLWVWRRMNENGIEPSLYTYNFLMNGLVNSMFIESAEQVFEVMENGKTRPDIITYNTLIKGYCKAGKMVKAMKKFKDMEIRNVEPDKITYMTLIQACYGENDFDACLSLYHEMVEKGLEIPSHAYSLVIGGLCKDGKYAQACVVFEDMCRRRCKANVAIYTALIDCRVKSGNVEAAISLFERMKNEGLAPDEVTYGAIINGLSKNGRLDEAIDYFKVCRDDGVNVNSTIYCSLIDGLAKGGRVGEAETFFEEMGKNGCTHDSYCYNVMIDALAKCGKIDEALALFNEMDAEGCDQTVYTYTILIDGLFKKHKNEEALKLWNMMIDKGIAPTSSSFRVLSIGLCLSGKVARACKILDELAPMGVIPENAFEDMINALCKVGRIEQACKLADGVVDRGREIPGRVRTILINSLRKSGNVDLAMKLLHSKIGIGYDRMGSIKRRVKFKSLLES*

Click here to download the sequence:
Link to NCBI Protein BLAST