Transcript Information: S_Transcript_161692.p1


Annotated TAIR IDAT1G43722.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G28730.1); Has 924 Blast hits to 912 proteins in 109 species: Archae - 0; Bacteria - 0; Metazoa - 222; Fungi - 31; Plants - 661; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16496403-16497377 | Forward length=324
E-Value3E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 131.277135472274
Replicate 231.843201423217
Replicate 331.371664472104
Condition 2: 8 Hour
Replicate 116.268854468741
Replicate 219.604197261616
Replicate 325.491116723483
Condition 3: 24 Hour
Replicate 139.410872276845
Replicate 247.196803488888
Replicate 355.384489260719


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_161692.p1 GENE.S_Transcript_161692~~S_Transcript_161692.p1 ORF type:internal len:97 (+),score=14.43,DDE_Tnp_4|PF13359.2|1.4e-12 S_Transcript_161692:3-290(+)
TTTTTTGTGCCTGGGTGGCCTGGTTCGGTTCATGACAACCGAATTCTAAAGGATGCACTTGAAGATTCAAAGAAGGCTTTCCCACATCCACCTAAAGGTAAATATTATGTTGTAGATGCTGGTTATCCTAACATGAAAAAATACTTGGCCCCATCTAAAGGTCAAAAATATCATTTAGCTGATTTTCGAAGCTCTAGCCAACCTTCAACTGGATTTTGTGAAGTGTTCAATTACAATCAAGCATCGTTGAGAAATGTAGTTGACCGCACAATAGAGGTATGGAAAAAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_161692.p1 GENE.S_Transcript_161692~~S_Transcript_161692.p1 ORF type:internal len:97 (+),score=14.43,DDE_Tnp_4|PF13359.2|1.4e-12 S_Transcript_161692:3-290(+)
FFVPGWPGSVHDNRILKDALEDSKKAFPHPPKGKYYVVDAGYPNMKKYLAPSKGQKYHLADFRSSSQPSTGFCEVFNYNQASLRNVVDRTIEVWKN

Click here to download the sequence:
Link to NCBI Protein BLAST