Transcript Information: S_Transcript_161806.p1


Annotated TAIR IDAT3G06350.1
Annotated Gene Namedehydroquinate dehydratase, putative / shikimate dehydrogenase, putative
Annotated Gene Symbol(s)EMB3004, MEE32
Annotation TypeHomolog
Chromosome Positionchr3:1924536-1927701 | Reverse length=603
E-Value3E-98
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.86354871264597
Replicate 21.3016395019183
Replicate 31.6321005383717
Condition 2: 8 Hour
Replicate 11.446855390248
Replicate 21.3858667298946
Replicate 32.0121154081398
Condition 3: 24 Hour
Replicate 10.64439184338036
Replicate 22.0725019435598
Replicate 32.3808419497455


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_161806.p1 GENE.S_Transcript_161806~~S_Transcript_161806.p1 ORF type:3prime_partial len:339 (+),score=73.35,DHquinase_I|PF01487.11|1.9e-27,DHquinase_I|PF01487.11|7.5e+03,Shikimate_dh_N|PF08501.7|2.5e-20,Shikimate_DH|PF01488.16|3.9e-06 S_Transcript_161806:175-1188(+)
ATGAAATCACCCCCTTCTGTGGAAGAGATAGGCATCCTGGTGGCAAGAATTCAAGCAACTGGAGCTGACATAGTCAAGATTGCAACTACTGCGCTAGACATTACAGATTGTGCGCGTATTTTGCAACTACTCCCACATTCTCAGGTTCCAATGATTGGACTGGTTATGGGTGAAAAGGGAGCGATATCAAGGATACTATGTGCTAAATTTGGTGGCTTTCTTACATTTGGGACACTTGAAGGTGGAGCAGTATCAACTCCTGGACAACCTACTGTCAAAGATCTGCTAAATTTGTATAACTTCAGACTGAGTGGGCCTGATACCAAAGTTCATGGAGTTATTGGGAATCCAGTTGGTCATAGCAAGAGTCCTCATTTGTATAATCCTGCCTTTAAGTCTGTTGGCTTTGATGGAATCTACTTGCATTTCTTGGTGGATAGTGTGCCTAAGTTTCTTGACACATATTCTTCTCCTGATTTTGTTGGATACAGTTATGGAATTCCACACAAGATGGCTGGACTTTCATGCTATGATGAAGTGGATCCAACTGCAAAGGCAATTGGAGCCATAAATTGCATGATAAAGAGGCCAACTGATGGGAAACTATTAGGTTATAACTCTGATTACATGGGAGCTATTGAAGAAGGGTTAGAAGGTGTAAATGGTGAAAGCCCTGAATTAGGGTCACCCTTGGCTGGCAAACTATTCGTTGTCGTTGGAGCTGGTGGTGCAGCAAAGGCACTTGCCTATGGAGCAAAAGCCAAAGGGGCTAGGGTGGTCATCGCCAATCACACTCTCGAAAAGGGTGTGGATTTAGCAAATAAAGTGGGTGGAAAAGCTATCCATTTTGATGAACTAATTGACTTTGCTCCAGAAGATGGAATGGTTTTAGCAAATGCTACACCTGTTGTAATGAAACCAAATACTGACCATACACCTATTTCTAAGGAAGCTCTGAAGCGTTACGCTCTTGTTTTTGATGCTATATATACACCAAAGTTAACAAGGCTCTTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_161806.p1 GENE.S_Transcript_161806~~S_Transcript_161806.p1 ORF type:3prime_partial len:339 (+),score=73.35,DHquinase_I|PF01487.11|1.9e-27,DHquinase_I|PF01487.11|7.5e+03,Shikimate_dh_N|PF08501.7|2.5e-20,Shikimate_DH|PF01488.16|3.9e-06 S_Transcript_161806:175-1188(+)
MKSPPSVEEIGILVARIQATGADIVKIATTALDITDCARILQLLPHSQVPMIGLVMGEKGAISRILCAKFGGFLTFGTLEGGAVSTPGQPTVKDLLNLYNFRLSGPDTKVHGVIGNPVGHSKSPHLYNPAFKSVGFDGIYLHFLVDSVPKFLDTYSSPDFVGYSYGIPHKMAGLSCYDEVDPTAKAIGAINCMIKRPTDGKLLGYNSDYMGAIEEGLEGVNGESPELGSPLAGKLFVVVGAGGAAKALAYGAKAKGARVVIANHTLEKGVDLANKVGGKAIHFDELIDFAPEDGMVLANATPVVMKPNTDHTPISKEALKRYALVFDAIYTPKLTRLL

Click here to download the sequence:
Link to NCBI Protein BLAST