Transcript Information: S_Transcript_161927.p1


Annotated TAIR IDAT3G23560.1
Annotated Gene NameMATE efflux family protein
Annotated Gene Symbol(s)ALF5
Annotation TypeOrtholog
Chromosome Positionchr3:8454361-8456588 | Reverse length=477
E-Value4.1E-47
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.2767157621478
Replicate 28.1784478532167
Replicate 38.9033898334623
Condition 2: 8 Hour
Replicate 11.286877001896
Replicate 21.5428861130846
Replicate 32.2050876832739
Condition 3: 24 Hour
Replicate 16.7794466005292
Replicate 29.5735066141467
Replicate 311.741296533416


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_161927.p1 GENE.S_Transcript_161927~~S_Transcript_161927.p1 ORF type:3prime_partial len:116 (+),score=20.84,MatE|PF01554.14|1.4e-15 S_Transcript_161927:138-482(+)
ATGGCAAGTAGTGGTGGCACAGACGGCGTAGGAGCGCCATTACTGGCGGCGAGAAGCGATGGAGGAAGGTGGTGGAAGAAGGTGGTGGATGTGGAGGAAGGGAAGATACAGATGGTAATAGCACTGCCGATGGTGCTAACCAATGTTTTTTACTACATCATCCCTTTGGTGTCAGTTATGTTTGCCGGTCACCTTGGTGAGCTCCAGCTTGCTGCCTCCACCCTTGCTAACTCTTGGGCAACCGTTACTGGTTATGCTTTCATGCTAGGCCTCAGTGGAGCACTTGAGACACTATGTGGGCAAGCATTTGGAGCAAGATGTTACAAAATGTTGGGTGTTCATCTC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_161927.p1 GENE.S_Transcript_161927~~S_Transcript_161927.p1 ORF type:3prime_partial len:116 (+),score=20.84,MatE|PF01554.14|1.4e-15 S_Transcript_161927:138-482(+)
MASSGGTDGVGAPLLAARSDGGRWWKKVVDVEEGKIQMVIALPMVLTNVFYYIIPLVSVMFAGHLGELQLAASTLANSWATVTGYAFMLGLSGALETLCGQAFGARCYKMLGVHL

Click here to download the sequence:
Link to NCBI Protein BLAST