Transcript Information: S_Transcript_16199.p1


Annotated TAIR IDAT4G37930.1
Annotated Gene Nameserine transhydroxymethyltransferase 1
Annotated Gene Symbol(s)SHM1, STM, SHMT1
Annotation TypeOrtholog
Chromosome Positionchr4:17831891-17834742 | Reverse length=517
E-Value1.1E-245
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 18.4218358339179
Replicate 224.799692565915
Replicate 352.013184802863
Condition 2: 8 Hour
Replicate 125.266538401059
Replicate 231.094037729645
Replicate 323.744235306815
Condition 3: 24 Hour
Replicate 126.103253183697
Replicate 239.934209764906
Replicate 337.673433415237


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16199.p1 GENE.S_Transcript_16199~~S_Transcript_16199.p1 ORF type:complete len:395 (+),score=68.38,SHMT|PF00464.15|3.8e-170 S_Transcript_16199:263-1447(+)
ATGGCGATGGCAACCACCCTTCGCAAGCTCTCCAATTCCGTCAACAAACCTATTCGCAGCGCCTTCAATGGCGGTCCTCTCTACTATATGTCGTCCTTGCCAAATGAAGCTGTATACGAAAAGGAGAAACGCGTTTCATGGCCGAAACAATTGAACGCTCCGCTGGAAGCCGTTGATCCTGAAATCGCCGACATTATCGAGCATGAAAAGGCCAGACAGTGGAAGGGTCTGGAACTTATTCCATCAGAGAATTTCACTTCAGTCTCTGTGATGCAAGCTGTTGGGTCTGTCATGACCAACAAATACAGTGAAGGATATCCTGGAGCTAGATACTATGGAGGGAATGAATTCATTGATATGGCTGAAACCTTATGCCAAAAGCGTGCATTGGAAGCATTTCGATTGGACCCTGAAAAATGGGGAGTGAATGTCCAACCTCTTTCTGGATCACCAGCAAACTTCCAAGTTTACACTGCTCTTTTAAAGCCTCATGATAGAATCATGGCACTTGATCTTCCACATGGTGGACATCTGTCTCATGGATACCAGACCGATACCAAGAAGATATCAGCTGTATCTATCTTTTTCGAGACAATGCCATACAGATTGAATGAAAGCACTGGTTACATTGATTATGATCAGTTGGAGAAAAGTGCCTCACTATTCCGACCAAAACTGATAGTTGCTGGAGCTAGTGCCTATGCAAGACTGTATGATTATGAACGTATTCGCAAGGTCTGTAACAAACAGAAAGCAATTATGTTGGCAGATATGGCACATATTAGTGGGTTGGTCGCAGCTGGTGTAATACCATCACCATTTGATTATGCTGATGTTGTAACCACTACAACTCACAAGTCCCTTCGTGGGCCACGTGGAGCAATGATTTTCTTCAGGAAGGGTGTAAAGGAGATTAACAAACAAGGGAAGGAGGTGTTGTATGACTATGAGGACAAGATAAATCAGGCTGTCTTTCCTGGACTCCAAGGTGGTCCTCACAATCACACAATAACTGCCTTAGCAGTGGCTTTAAAACAGGCTATGACTCCTGAATACAGAGCATACCAGGAGCAAGTCATGAGCAATTCTGCAAAGTTTGCCGAGGTGATTTGCATGGAAATGTTAGCAGTGGGAGATAGTTTGTGTTTATGGAAGATTCATTTCTACGTTGTATGCATAGTATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16199.p1 GENE.S_Transcript_16199~~S_Transcript_16199.p1 ORF type:complete len:395 (+),score=68.38,SHMT|PF00464.15|3.8e-170 S_Transcript_16199:263-1447(+)
MAMATTLRKLSNSVNKPIRSAFNGGPLYYMSSLPNEAVYEKEKRVSWPKQLNAPLEAVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEFIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSASLFRPKLIVAGASAYARLYDYERIRKVCNKQKAIMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGVKEINKQGKEVLYDYEDKINQAVFPGLQGGPHNHTITALAVALKQAMTPEYRAYQEQVMSNSAKFAEVICMEMLAVGDSLCLWKIHFYVVCIV*

Click here to download the sequence:
Link to NCBI Protein BLAST