Transcript Information: S_Transcript_162013.p1


Annotated TAIR IDAT4G16835.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:9472763-9474803 | Forward length=656
E-Value1.4E-229
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.8224768593654
Replicate 20.633148486198
Replicate 30.65139906697044
Condition 2: 8 Hour
Replicate 12.1654921734837
Replicate 21.0864915454172
Replicate 31.7880843465547
Condition 3: 24 Hour
Replicate 10.8680086155203
Replicate 20.80048782609615
Replicate 31.2805894510324


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_162013.p1 GENE.S_Transcript_162013~~S_Transcript_162013.p1 ORF type:5prime_partial len:453 (+),score=81.87,PPR|PF01535.16|4.2e-05,PPR|PF01535.16|4.7e-09,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|1.4e-09,PPR|PF01535.16|2.8,PPR|PF01535.16|0.001,PPR|PF01535.16|12,PPR|PF01535.16|9e+03,PPR_2|PF13041.2|3.8e-05,PPR_2|PF13041.2|8.9e-11,PPR_2|PF13041.2|1e-05,PPR_2|PF13041.2|5.8e-14,PPR_2|PF13041.2|9.3e+02,PPR_2|PF13041.2|0.73,PPR_2|PF13041.2|6.5e+02,PPR_2|PF13041.2|4.8e+03,DYW_deaminase|PF14432.2|3.6e-42,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|0.00019,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|5.4e-06,PPR_1|PF12854.3|0.01,PPR_3|PF13812.2|0.044,PPR_3|PF13812.2|0.00039,PPR_3|PF13812.2|0.29,PPR_3|PF13812.2|2.5e-05,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|13 S_Transcript_162013:3-1361(+)
TCAGCGTTGACATTGTTTAGTTTGGACCCATTTACGAGTGTTGTTGCTTGGACTGCGTTGATAACTGGGTACATGAAGGTTGGGAAAGTTGAGTTGGCTGAGAGAATATTCGAGGAAGTGCCTGTGAAGAGCTCTGTGACTTGGAATGCTATGATTTCTGGTTATGTTGAGAATTCTAGAGCAGAGGATGCCGTGAGGCTTTTCAAGATGATGGTGGAATCTGGGGTCAGGGCGACTCCGTTAACCATGACTAGTGCTTTGTTGGGTTGTAGTAATATGTCTGCATTGGTGTTAGGCAAACAAATTCACCAATTTTTGCGCAAGTCCCAGTTATACTTGGATACAACTGTTGGAACTTCATTGTTGAGTATGTACTGCAAATGTGGAGTTTTGGAGGATGCATGGAAGTTGTTTATGGAGATGCCAAGGAAAGACTTGGTGACTTGGAATGCTATGATTTCTGGTTATGCAACTCATGGTGATGGTGAAAAAGCTCTTGCTCTATTTGATAAGATGAGAAACAATAAGATAAAGCCAGATTGGATCACCTTTGTTGGGGTTTTGTCGGCTTGCAACCACACTGGATTGGTAGAACTTGGGATGCAATATTTCGAGTCAATGCAGGGGGATTATGGTGTTGAGGCTAAACCAGAGCACTATTCATGCATGGTTGACCTACTAGGCCGTGCTGGTAAGCTAAAAGAAGCTACTGACTTGATAGAAAAAATGCCATTTAAACCACATGCCGCTATATTTGGGAGCCTTTTAGGAGCCTCGAGGATCCACAAGAACATAGAATTAGCTGAGTTTGCCGCAAACAACTTGCTTAGAATTGATCCTTCAAACGCTGCAGCATATGTCCAGCTCGGTAATGTTTATGCAGCAAGGGGTAGGTGGGACAATGTCTCTAGGGTTTGGCAGTTGATGAAGGGTAATAGCATTGGTAAGATGCCAGGCTACAGTTGGATAGAGATAAAGAGTGTAGTTCATGAGTTCAGATCAAGCGACAAAGAACACCCAGAATTGCCCTTGATACACGAAAAGCTGCAGGAGCTAGAGAAGAAAATGAAGTGTGCAGGTTATACGCCTGATCTTGAATTTGCGTTGCATGATGTTAGTAGGGGGCAAAAAGAAAAGCTTCTATTATGGCACAGTGAGAAACTGGCAATTGCTTACGGTCTGATTAAGGTGCCTCTAGGCTTGCCAATACGTGTGTTTAAGAATCTTAGAGTATGTGGGGATTGTCATAAAGCTATAAAGTACATATCAGCCATTGAAGGTAGGGAAATAATTCTAAGAGATAATACTAGGTTTCACCATTTCAAAAATGGGAGCTGCTCTTGTGGTGATTACTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_162013.p1 GENE.S_Transcript_162013~~S_Transcript_162013.p1 ORF type:5prime_partial len:453 (+),score=81.87,PPR|PF01535.16|4.2e-05,PPR|PF01535.16|4.7e-09,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|1.4e-09,PPR|PF01535.16|2.8,PPR|PF01535.16|0.001,PPR|PF01535.16|12,PPR|PF01535.16|9e+03,PPR_2|PF13041.2|3.8e-05,PPR_2|PF13041.2|8.9e-11,PPR_2|PF13041.2|1e-05,PPR_2|PF13041.2|5.8e-14,PPR_2|PF13041.2|9.3e+02,PPR_2|PF13041.2|0.73,PPR_2|PF13041.2|6.5e+02,PPR_2|PF13041.2|4.8e+03,DYW_deaminase|PF14432.2|3.6e-42,PPR_1|PF12854.3|0.0012,PPR_1|PF12854.3|0.00019,PPR_1|PF12854.3|0.0013,PPR_1|PF12854.3|5.4e-06,PPR_1|PF12854.3|0.01,PPR_3|PF13812.2|0.044,PPR_3|PF13812.2|0.00039,PPR_3|PF13812.2|0.29,PPR_3|PF13812.2|2.5e-05,PPR_3|PF13812.2|3.6e+02,PPR_3|PF13812.2|0.51,PPR_3|PF13812.2|13 S_Transcript_162013:3-1361(+)
SALTLFSLDPFTSVVAWTALITGYMKVGKVELAERIFEEVPVKSSVTWNAMISGYVENSRAEDAVRLFKMMVESGVRATPLTMTSALLGCSNMSALVLGKQIHQFLRKSQLYLDTTVGTSLLSMYCKCGVLEDAWKLFMEMPRKDLVTWNAMISGYATHGDGEKALALFDKMRNNKIKPDWITFVGVLSACNHTGLVELGMQYFESMQGDYGVEAKPEHYSCMVDLLGRAGKLKEATDLIEKMPFKPHAAIFGSLLGASRIHKNIELAEFAANNLLRIDPSNAAAYVQLGNVYAARGRWDNVSRVWQLMKGNSIGKMPGYSWIEIKSVVHEFRSSDKEHPELPLIHEKLQELEKKMKCAGYTPDLEFALHDVSRGQKEKLLLWHSEKLAIAYGLIKVPLGLPIRVFKNLRVCGDCHKAIKYISAIEGREIILRDNTRFHHFKNGSCSCGDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST