Transcript Information: S_Transcript_162037.p1


Annotated TAIR IDAT5G55960.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0118 (InterPro:IPR002549); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22662726-22664762 | Forward length=648
E-Value4E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7850815246119
Replicate 22.5654406462226
Replicate 31.2867025174605
Condition 2: 8 Hour
Replicate 11.7357875839527
Replicate 22.6013777488054
Replicate 32.726445623893
Condition 3: 24 Hour
Replicate 11.2700513657322
Replicate 21.3176634637411
Replicate 32.346236688848


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_162037.p1 GENE.S_Transcript_162037~~S_Transcript_162037.p1 ORF type:5prime_partial len:86 (-),score=7.70 S_Transcript_162037:108-365(-)
GAACAATCTAGGGCAAATAAACCACCTGATGTAGAACTTGAAAAATGGAACTGGCTAGTTGATTTTTGGATGACAGAAAAAAGAACAGTTTCTGATACAATCAACTGTATTTTTCTCGGTTCTGTACTATCTTCTAACATCAGAATCCGGTGGAGTGATCGAACAAATCATGAAAATCATACCAGCACCAACATCTATGAAAAATCGATGTGTTCAGGCTCTCAACAATGCAATCTCAGGGGTGCTATACAGAGATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_162037.p1 GENE.S_Transcript_162037~~S_Transcript_162037.p1 ORF type:5prime_partial len:86 (-),score=7.70 S_Transcript_162037:108-365(-)
EQSRANKPPDVELEKWNWLVDFWMTEKRTVSDTINCIFLGSVLSSNIRIRWSDRTNHENHTSTNIYEKSMCSGSQQCNLRGAIQR*

Click here to download the sequence:
Link to NCBI Protein BLAST