Transcript Information: S_Transcript_162296.p1


Annotated TAIR IDAT4G08320.2
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)TPR8
Annotation TypeOrtholog
Chromosome Positionchr4:5252853-5254990 | Forward length=427
E-Value2.9E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.7419455818065
Replicate 21.0697110088492
Replicate 31.3412898969891
Condition 2: 8 Hour
Replicate 12.4556510062153
Replicate 22.9829131519636
Replicate 31.5502434621805
Condition 3: 24 Hour
Replicate 12.2506849656976
Replicate 22.3350593745328
Replicate 31.5286087518252


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_162296.p1 GENE.S_Transcript_162296~~S_Transcript_162296.p1 ORF type:complete len:165 (-),score=32.56,TPR_11|PF13414.2|7.7e+03,TPR_11|PF13414.2|5.6e-15,TPR_11|PF13414.2|2.5e-12,TPR_1|PF00515.24|0.00037,TPR_1|PF00515.24|2e-07,TPR_1|PF00515.24|1.1e-06,TPR_2|PF07719.13|0.059,TPR_2|PF07719.13|5.3e-05,TPR_2|PF07719.13|1.5e-06,TPR_17|PF13431.2|1.8e+03,TPR_17|PF13431.2|6.5,TPR_17|PF13431.2|4.9e-07,TPR_17|PF13431.2|4.4,TPR_16|PF13432.2|16,TPR_16|PF13432.2|1.1e-07,TPR_12|PF13424.2|0.28,TPR_12|PF13424.2|3.6e-07,TPR_14|PF13428.2|60,TPR_14|PF13428.2|25,TPR_14|PF13428.2|0.001,TPR_8|PF13181.2|3e+02,TPR_8|PF13181.2|0.03,TPR_8|PF13181.2|0.0057 S_Transcript_162296:202-696(-)
ATGCACTTCTTTAGGACAACACCAAATGGAGATGATGATCATGTATTGCTGGATCGAGCAACATGTCTGTTTCATGATGCTGTCAATGAGATGGAAAGATCTGGTTGCAAGACATGTGATAGGAAAAGCTTGGCTGATGCTCTAAAAACCTTAGGGAACAAAGCCATGCAGTCTAAGTTATATGCTGATGCCATTGAGCTGTATACTTGTGCTATAGCACTTTGTGGAAACAATGCTGTGTACTACTGTAACAGGGCAGCTGGTTATACTCAAACTCACCAATACAATGAAGCTGTGAAAGATTGCCTTAAATCCATCGAAATTGATCCAAATTATAGCAAGGCATACAGCCGGTTAGGTCTTGCTTACTATGCACAAGGAAATTATAGTGATGCGATCAATAAAGGATTCAGAAGAGCATTAGAACTGGATCCAAATAATGATGCTGTCAAAGAGAATATTCGGGTATGCATATCACGATGTCATTGCCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_162296.p1 GENE.S_Transcript_162296~~S_Transcript_162296.p1 ORF type:complete len:165 (-),score=32.56,TPR_11|PF13414.2|7.7e+03,TPR_11|PF13414.2|5.6e-15,TPR_11|PF13414.2|2.5e-12,TPR_1|PF00515.24|0.00037,TPR_1|PF00515.24|2e-07,TPR_1|PF00515.24|1.1e-06,TPR_2|PF07719.13|0.059,TPR_2|PF07719.13|5.3e-05,TPR_2|PF07719.13|1.5e-06,TPR_17|PF13431.2|1.8e+03,TPR_17|PF13431.2|6.5,TPR_17|PF13431.2|4.9e-07,TPR_17|PF13431.2|4.4,TPR_16|PF13432.2|16,TPR_16|PF13432.2|1.1e-07,TPR_12|PF13424.2|0.28,TPR_12|PF13424.2|3.6e-07,TPR_14|PF13428.2|60,TPR_14|PF13428.2|25,TPR_14|PF13428.2|0.001,TPR_8|PF13181.2|3e+02,TPR_8|PF13181.2|0.03,TPR_8|PF13181.2|0.0057 S_Transcript_162296:202-696(-)
MHFFRTTPNGDDDHVLLDRATCLFHDAVNEMERSGCKTCDRKSLADALKTLGNKAMQSKLYADAIELYTCAIALCGNNAVYYCNRAAGYTQTHQYNEAVKDCLKSIEIDPNYSKAYSRLGLAYYAQGNYSDAINKGFRRALELDPNNDAVKENIRVCISRCHCH*

Click here to download the sequence:
Link to NCBI Protein BLAST