Transcript Information: S_Transcript_162501.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value8E-22
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.90469126011945
Replicate 21.3750180460774
Replicate 30.62694853541985
Condition 2: 8 Hour
Replicate 12.0540035999505
Replicate 21.4576558603788
Replicate 31.3888512603812
Condition 3: 24 Hour
Replicate 11.7946221564511
Replicate 22.5039338568769
Replicate 31.5004615651769


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_162501.p1 GENE.S_Transcript_162501~~S_Transcript_162501.p1 ORF type:complete len:353 (+),score=39.78,zf-RVT|PF13966.2|7.7e+03,zf-RVT|PF13966.2|7.1e-18,zf-RVT|PF13966.2|8.6e+03 S_Transcript_162501:3300-4358(+)
ATGCTACTATGTGTAAGGGGTTGCTTGAGAAAATTCGTAAGAAGCTTCCTCATTGGTCTAATCAATACCCTCTCTTATGCTGGGCGTATTGAGCTGGTAAATTCTGTCCTCTTTGGTATTGAATCTTTTTGGTGCTCTGCTTTTATGCTGCCAAAATCTATTATTGGTGAGATAGAGAAGCTTTGTCAACAATTTGTGTGGGGAATTCAAGACAGGCGTGGCAAGCCTATATTTTTTGCCTGGAAGAAAATGTGCCAAGATAAACAGCATGGTGGGTTTAATACCAAAGAGATACTTAGCTGGAACAAAAGTCTCATTCTTAAGTGGTTTATTAAGCTCTTCCGAGGTGTTAATTCACTATGGGTGGATTGGATTACAAGCTATTATATTTATCAGGCTTCCATCTTGGTAGTTCAGCCTCGGCAAGGTGATTCGTGGGCTTGGAAAAACTTACTAAAAATCAGGGATGAGTTTCTTCATCAAGCTGGTAGTGCTCCTGCTGCGATTAAACTGATTCTTGATTGGGGTGATCGTTCTTCCAAATTCTATTCTTTCTTTCAAAAGGGGAGCCAGAGAGTTACATGGTCTAGAGTGGTTTGGGACTCTGTTAATACTCCTAAACACTCTGTGATCGTTGTTTTGGCCATTCACAATGCTCTTCCTACTCTTGATAATCTGATTCGAAGAGGTCTTTTCTTTGTTAATCGATGTACTCTCTGTCAGCACCAGATGGAATCAGTCCAACATCTCTTTTTTGCTTGTAACTTTGCTCAATCTGTTTGGCAACAGATTCTGCTCTGGCCTGGATTTACTCGCCGTGCCAAAAGTTTGAAAGGTGAGTTGAAATGGCAACTCAAACATGCCCGAGGAAAGCATTGGAAGAAGTGGTGGCAGTGTTGTGCACTTATCTCTACTGTGTATGAGCTGTGGTATGAGCGTAATTCCAGGATTTTTGTCGAGAAAACTTGGTCTGATCAACAGCTTGTTCATCGGATCAAATTTCTTGTTTGTGTTAGAATGCTACACTCTTGTAAAGCTCCTGATATGTATCTCCTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_162501.p1 GENE.S_Transcript_162501~~S_Transcript_162501.p1 ORF type:complete len:353 (+),score=39.78,zf-RVT|PF13966.2|7.7e+03,zf-RVT|PF13966.2|7.1e-18,zf-RVT|PF13966.2|8.6e+03 S_Transcript_162501:3300-4358(+)
MLLCVRGCLRKFVRSFLIGLINTLSYAGRIELVNSVLFGIESFWCSAFMLPKSIIGEIEKLCQQFVWGIQDRRGKPIFFAWKKMCQDKQHGGFNTKEILSWNKSLILKWFIKLFRGVNSLWVDWITSYYIYQASILVVQPRQGDSWAWKNLLKIRDEFLHQAGSAPAAIKLILDWGDRSSKFYSFFQKGSQRVTWSRVVWDSVNTPKHSVIVVLAIHNALPTLDNLIRRGLFFVNRCTLCQHQMESVQHLFFACNFAQSVWQQILLWPGFTRRAKSLKGELKWQLKHARGKHWKKWWQCCALISTVYELWYERNSRIFVEKTWSDQQLVHRIKFLVCVRMLHSCKAPDMYLL*

Click here to download the sequence:
Link to NCBI Protein BLAST