Transcript Information: S_Transcript_162511.p1


Annotated TAIR IDATMG01250.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)
Annotated Gene Symbol(s)ORF102
Annotation TypeHomolog
Chromosome PositionchrM:310514-310882 | Forward length=122
E-Value4E-06
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.0645200494072
Replicate 21.1031394778757
Replicate 30.73770944334402
Condition 2: 8 Hour
Replicate 11.7060312253706
Replicate 21.1185924319863
Replicate 31.4921093323487
Condition 3: 24 Hour
Replicate 11.3106930094356
Replicate 21.5864668103443
Replicate 31.7655431083581


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_162511.p1 GENE.S_Transcript_162511~~S_Transcript_162511.p1 ORF type:complete len:100 (+),score=18.33,RVT_1|PF00078.23|5.2e-13 S_Transcript_162511:132-431(+)
ATGGATGGTAAAGGTTATTTTAAGGGCAAATATGGCCTAAGGCAGGGTGATCCTCTCTCCCCTTACCTGTTTGTCCTCTGTATGGAGGGGCTTCCAAGGAGGCACAGAAGACTCGAGCAAATTTTAGGCTACTCTTTCTACCCAAAATGTGTTAGAGTGGGTCTTACTCATTTGGCATTTGCAAATGACTTGCTTCTATTCTGTAGAGGAGGAGATGTTCCTTATATCAGGGCAGCAATTGACTGTGTGAGTGGGTTTTCAAAGCAATCAGGTCTCTTCATAAATCCTCAGAAAAACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_162511.p1 GENE.S_Transcript_162511~~S_Transcript_162511.p1 ORF type:complete len:100 (+),score=18.33,RVT_1|PF00078.23|5.2e-13 S_Transcript_162511:132-431(+)
MDGKGYFKGKYGLRQGDPLSPYLFVLCMEGLPRRHRRLEQILGYSFYPKCVRVGLTHLAFANDLLLFCRGGDVPYIRAAIDCVSGFSKQSGLFINPQKN*

Click here to download the sequence:
Link to NCBI Protein BLAST