Transcript Information: S_Transcript_162517.p1


Annotated TAIR IDAT3G48490.1
Annotated Gene Nameunknown protein; Has 16 Blast hits to 16 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 1; Plants - 15; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:17961338-17961800 | Forward length=120
E-Value1.2E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.4613180333115
Replicate 21.7854280566775
Replicate 30.85284328710292
Condition 2: 8 Hour
Replicate 10.73960891273294
Replicate 21.939755662404
Replicate 31.601768895172
Condition 3: 24 Hour
Replicate 10.37881300850741
Replicate 21.5720562943131
Replicate 31.02054514934


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_162517.p1 GENE.S_Transcript_162517~~S_Transcript_162517.p1 ORF type:5prime_partial len:173 (+),score=28.29 S_Transcript_162517:1-519(+)
CCCATTTCAAAAATCTCAGCCACAGAGAGAGAAGAGAAAAGAGAGAAGAAAAACAAAGGGATGTTTGGAAGAATAAGGGCATCGCCATCACCGCTAGAATGCCTGGAATCAGAGAGACAGAAAACCCCTTCTAAGCTTTTCAAGGGCGATTCTCTCTCCATCTATGAGGCCACACTCGTGAAGCTGAAGCAAGGCTCTAAACGTAGTCTAAGTGTGGAGGAGCATGATATAATTATGAGCCCAGCTTCGCAAGATTCAATGGATTTTGAATCAGATGGGAATGTCTCAGAGGATTCATCCAAGGTCAGTGGCTCGTCCAGCCAGCAAGGAATGTCTCCCTGTATTAGTGAGAGTTCCTCTGCCAGTAGTTCGTCAAGCCCTAGTGAGGAACGTAAGAAGGGAAAAGAAGTCTCGATACAGTTCCTATTTTCCAGGTACAACAGTTCTCACACTAAACAAGGGTCGTGCAACACTGAAATCGTTAGACATTCTTCGATGAACAGCACTGAAATCATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_162517.p1 GENE.S_Transcript_162517~~S_Transcript_162517.p1 ORF type:5prime_partial len:173 (+),score=28.29 S_Transcript_162517:1-519(+)
PISKISATEREEKREKKNKGMFGRIRASPSPLECLESERQKTPSKLFKGDSLSIYEATLVKLKQGSKRSLSVEEHDIIMSPASQDSMDFESDGNVSEDSSKVSGSSSQQGMSPCISESSSASSSSSPSEERKKGKEVSIQFLFSRYNSSHTKQGSCNTEIVRHSSMNSTEII*

Click here to download the sequence:
Link to NCBI Protein BLAST