Transcript Information: S_Transcript_162530.p1


Annotated TAIR IDAT1G43730.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:16508723-16509784 | Reverse length=320
E-Value2E-10
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.15207429277246
Replicate 20
Replicate 30.10538706333486
Condition 2: 8 Hour
Replicate 10
Replicate 20.12783913508415
Replicate 30.24360968691407
Condition 3: 24 Hour
Replicate 10
Replicate 20.25901498944397
Replicate 30.28825193605847


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_162530.p1 GENE.S_Transcript_162530~~S_Transcript_162530.p1 ORF type:complete len:175 (-),score=26.79,zf-RVT|PF13966.2|3.8e-17,zf-RVT|PF13966.2|7.2e+03 S_Transcript_162530:147-671(-)
ATGTGGCTCTTTTCTTCGTTGTCTACGGGGACGGCTGGGGGTCCTTCCTTTCCTATCGCTAGATTTATCTGGAAGGCTAAGGTCCCTCTTAAGGTGAGAGCTTTTGTTTGGACTTTGGCTCTAGGGAGGATCAATACCAATGATATGCAGCAACGACGAAGGCCTTCTTGGTGCCTTTCTCCTGATATGTGCTTCATGTGTGGAGCAAGGGGGGGGACTGTCTCTCATTTGTTTCTCCATTGCCCTGCTGTGAGGTCTTTGTGGGCTTTGCTTTTTGGTGTGCGTGGGGAAGCTCTGGTGTGCCCTTCTAATGTGATGGAGTTCCTCCAAGTCCATTTTTGGGGGTTTGGTCGGGATAAGGAGTTGGGTATTCTTTGGCGTAATGCGATTCTTGCTGTCCTTTGGTGTGTGTGGCTGGAGAGGAATGCTCGGGTGTTTAATCAAGTCTCTCTTTCTCCTCCCCTCTTGTGGGAGCGTGTTACGTACTTGGCCTCCCTTTGGAGTAAGGCGGGGGGCTTTCCGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_162530.p1 GENE.S_Transcript_162530~~S_Transcript_162530.p1 ORF type:complete len:175 (-),score=26.79,zf-RVT|PF13966.2|3.8e-17,zf-RVT|PF13966.2|7.2e+03 S_Transcript_162530:147-671(-)
MWLFSSLSTGTAGGPSFPIARFIWKAKVPLKVRAFVWTLALGRINTNDMQQRRRPSWCLSPDMCFMCGARGGTVSHLFLHCPAVRSLWALLFGVRGEALVCPSNVMEFLQVHFWGFGRDKELGILWRNAILAVLWCVWLERNARVFNQVSLSPPLLWERVTYLASLWSKAGGFP*

Click here to download the sequence:
Link to NCBI Protein BLAST