Transcript Information: S_Transcript_162716.p1


Annotated TAIR IDAT4G13200.1
Annotated Gene Nameunknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, plastoglobule; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; Has 97 Blast hits to 97 proteins in 46 species: Archae - 0; Bacteria - 65; Metazoa - 2; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:7668292-7669166 | Reverse length=185
E-Value5E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 122.69233587464
Replicate 220.585370613931
Replicate 323.629755607113
Condition 2: 8 Hour
Replicate 119.326134974902
Replicate 220.274487829752
Replicate 321.601327706834
Condition 3: 24 Hour
Replicate 118.334098643892
Replicate 217.200214142764
Replicate 319.479525366451


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_162716.p1 GENE.S_Transcript_162716~~S_Transcript_162716.p1 ORF type:5prime_partial len:224 (+),score=57.24 S_Transcript_162716:2-673(+)
CCAGCAAAAAAAAACTCAAACTTTCTATCAACAGTTTCTCTGCAAGAAGAAGAAGAAGATCAAGAAGAAGAAAAAATGATGAGGGGTGGGGTTTCAGCCTCAGTTTCCTCACCATCTTCTTGTTCATCATTCCTTCTCAAATCCCAAAGCCCATCATTATCATTTCTCAAATTCAATGCAACTTACTCTCTATCCTTTCATTCTCAATCTCCAAGGCCTCGTTTCCAACCCATTTGCTGCTCTTCTTCTCCTGGTTCCCCTAACTCTGGTGAAGGTGACAGCAGAACTGTCCTTGATGCCTTTTTCTTGGGGAAAGCTCTTGGCGAGGCAGTGACTGAGCGGATTGAATCTACAGTTGGGGAGTTCCTGAGTACTGTTGGCAGATTGCAAGCAGAGCAACAAAAGCTGGTTCAGGATTTCCAGGACGACGTGCTGGAAAGAGCAAAAAGAGCCAAGGAAAAAGCAGCTCGTGAAGCCCTGGAAGAGCAAGGACGACTAGTCCCAAACACAACCATAGTGAATGCATCAGGAACAAATGGAGGTAGTCCAAGCGATGTGTCAATAAATCAGACCTCTGTGACTCCAGAATCAGCGGATAACCCAGACAGCCTTGTATCTCGAGTAGTTCGCAACGATCAAGATTCTCCTTCTAGTATACCAATTGATGAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_162716.p1 GENE.S_Transcript_162716~~S_Transcript_162716.p1 ORF type:5prime_partial len:224 (+),score=57.24 S_Transcript_162716:2-673(+)
PAKKNSNFLSTVSLQEEEEDQEEEKMMRGGVSASVSSPSSCSSFLLKSQSPSLSFLKFNATYSLSFHSQSPRPRFQPICCSSSPGSPNSGEGDSRTVLDAFFLGKALGEAVTERIESTVGEFLSTVGRLQAEQQKLVQDFQDDVLERAKRAKEKAAREALEEQGRLVPNTTIVNASGTNGGSPSDVSINQTSVTPESADNPDSLVSRVVRNDQDSPSSIPIDE*

Click here to download the sequence:
Link to NCBI Protein BLAST