Transcript Information: S_Transcript_162746.p1


Annotated TAIR IDAT2G01950.1
Annotated Gene NameBRI1-like 2
Annotated Gene Symbol(s)VH1, BRL2
Annotation TypeOrtholog
Chromosome Positionchr2:440805-444236 | Reverse length=1143
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.3552922455404
Replicate 23.5308442601086
Replicate 32.7347275928666
Condition 2: 8 Hour
Replicate 13.2007367022098
Replicate 21.8609494347693
Replicate 32.8331189854722
Condition 3: 24 Hour
Replicate 12.3306476056873
Replicate 23.2991624446582
Replicate 32.6225453043294


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_162746.p1 GENE.S_Transcript_162746~~S_Transcript_162746.p1 ORF type:complete len:1106 (+),score=247.94,LRR_8|PF13855.2|0.018,LRR_8|PF13855.2|1.2e-06,LRR_8|PF13855.2|0.00057,LRR_8|PF13855.2|6.3e-09,LRR_8|PF13855.2|1.5e-06,LRR_8|PF13855.2|0.062,LRR_8|PF13855.2|1.1e-07,LRR_8|PF13855.2|8.8e-06,LRR_8|PF13855.2|1.5e-07,LRR_8|PF13855.2|0.0055,Pkinase_Tyr|PF07714.13|7.2e-44,Pkinase|PF00069.21|3.2e-43,LRR_4|PF12799.3|0.29,LRR_4|PF12799.3|0.74,LRR_4|PF12799.3|0.31,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.00097,LRR_4|PF12799.3|0.012,LRR_4|PF12799.3|0.28,LRR_4|PF12799.3|0.0027,LRR_4|PF12799.3|2.8,LRR_4|PF12799.3|0.0019,LRR_4|PF12799.3|2.2,LRR_4|PF12799.3|5.7e+03,LRR_1|PF00560.29|8,LRR_1|PF00560.29|6.8,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|67,LRR_1|PF00560.29|14,LRR_1|PF00560.29|27,LRR_1|PF00560.29|7.2,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|17,LRR_1|PF00560.29|4.8e+02,LRR_1|PF00560.29|8.5e+02,LRR_1|PF00560.29|2.9e+02,LRR_1|PF00560.29|8.8,LRR_1|PF00560.29|46,LRR_1|PF00560.29|0.15,LRR_1|PF00560.29|0.77,LRR_1|PF00560.29|64,LRR_1|PF00560.29|1.5e+02,LRRNT_2|PF08263.8|2.4e-09 S_Transcript_162746:451-3768(+)
ATGAAATCAACAACTACCCCATTTCATATCTTCTTCCAAATATCTATCCTATGCATGGCATTTTCATGCCTAGCAAAAACACCATTAAATGATGCTGAAGCACTCTTAACCTTCAAGAAGATGATAGACAACACTGAAGAGCTCTCAAATTGGCAGATCACCAAGAAAACTCCTGTTTGTACTTGGGAAGGTGTTAACTGTTCTTCTGAAGGTCGAGTTACTCAGCTTGATCTTAATTGGCGTTTTCTCAAAGGCAATATTGTCAGCTTTGAACCCTTTTCTTCCTTAGACAAACTCTCTTACTTAGATTTGTCAGGAAACTCTTTTGTTATCAACTCCTCTGTTTCTTTATTTCAACTCCCACCTTCCATTGAGCAGCTCTATCTTTCTTCATTAGGTGTTGAGGGTGTCATTCCAGAGAATTTCTTCACTAATTTCCCAAACTTGAACACCTTAGATTTGTCTCAAAACAATCTGACAGGTTCACTGTCTGAAAATTTTTTGTGCACTTCTAGTAAGGTGCAGGCTTTGGACCTGTCAGCTAACAGACTGTCAGGTGGAATTCCTGTCATAGGTGGTAATACCACGTGTGGTGCTACTATTCAGACACTCAACCTGTCAACTAACCACTTCAGTGGGAAAATTCCTTCAGGTTTGAGGAATTTATCAGGTCTGCAGAAACTAGACCTGTCTCATAATTACCTTACTGGATCGGTCGAGCTGGGTCAGGTGTGTGAGTCACTGGTTGAGCTTCATTTGGCTTACAACAACCTGACAGGCTCGGTCCCCGACTCGTTAGGGTCCTGCAAGTGGCTGCAGTTTCTGGACCTGTCTAATAATAACCTGACCGGCCCTTTTTCGGGCCAGGCCCTCCAGGGACTTGAGTCCCTAGAGGTCCTAGTGATGACGAACAATGTCATCACAGGACGTTTTCCAGGTGCTGTTTCTAACTGCCCTAAGCTTAGGGTGGTGGATTTCAGCTCTAACCGGTTGTCAGGATCGATCCCGCCTGACCTGTGCTCTGGAGAAAGCTCCCTAGAGGAGCTCAGGCTGCCTGATAATCTTATGACAGGCAAAATACCGCCTGAGCTGTCAAAGTGCTCGAACCTGAGGACAGTTGACTTCAGTCTGAATTATCTGAATGGGTCTATACCTAGTGAGCTTGGCAATTTGCAGAATCTTGAGCAGTTTTTTGCATGGTATAATGAGTTGGAAGGGGAAATCCCACCAGAAATTGGGCAATGTAGTAAGCTGAAAGATCTGATACTGAATAACAACAAGCTTAGTGGTGAGATTCCTAAGGAGTTGTTCAGATGTAGCAACTTGGAGTGGATTTCTCTATCTTCTAACCAGTTGACAGGTCATATACCAAAGGAGTTTGGGCAGTTACAGAGACTGGCTGTTTTGCAGCTTGGGAATAATAGCTTTTTTGGAGAAATTCCTACCCAATTGGGTGATTGCAGGACTTTGGTTTGGCTTGATTTGAACAGTAATAATCTCACAGGTGAAATCCCTCCTAGGTTAGGAAGGCAACAAGGGAATCCTAAGATATATGGCATCCTTTCTGGAAACACCCTGGTGTTTGTCAGGAACATTGGGAATACCTGCAAAGGTGTTGGTGGCCTGCTTGAGTTTGCTGGAATTCGACCCGAGAGGCTGCTCCAGGTTCCCTCACTCAAGAACTGTGATTTCACTCGAATGTATTCGGGTGCAATCCTGAGTCTGTTTACTCAGTATGAGACATTGGAGTATCTTGATCTTTCTTACAATCAGTTACATGGAAAGATACCTGATGAGTTTGGGGATATGGTGGCTTTGCAAGTGCTTGAAATTTCCCATAATCAGTTATCAGGGGAAATCCCTGCATCACTTGGGAACTTGAAGAATATTGGGGTGTTTGATGCATCTTACAATAGGTTACAGGGGGAAATCCCAGATTCATTTTCTAATCTGTCATTTTTGGTGCAGATTGATTTGTCAAATAATCAGTTAACAGGACAGATCCCACAAAGAGGGCAGCTTAGTACACTTCCTGCTAGTCAGTATGCTAATAATCCGGGCCTCTGTGGGGTTCCCTTGCCTGAATGCAAGGATGTAGGTGGAGCCGGGGGGAGCAATCAAGTCGCTGATGGTTCAGAGGGAGGAAAAAGAAAATCATCTGGATCTTTCTGGACTAATAGCATTGTCTTGGGGGTGTTGATTTCTATTGCAAGTGTGTGCATTTTGGTTGTATGGATGATTGCAATGCGAGCAAGGAGGAAAGAGGCGGAAGAGGCTAAGATGCTCCATAGCCTCCAAGCATCACATGCTGCAACCACATGGAAGATCGACAAAGAGAGGGAGCCGTTGAGCATCAATGTGGCAACATTCCAAAGGCAGCTTAGGAAGCTCAAGTTCTCTCAGCTCATCGAGGCCACCAATGGGTTTTCAGCAGCCAGTCTCATTGGTTGTGGAGGGTTTGGGGAAGTCTTCAAGGCCACGTTGAAGGATGGATCGAGTGTTGCCATCAAGAAGTTAGTCAGGCTTAGCTGCCAAGGGGACCGGGAGTTCATGGCTGAGATGGAAACCCTAGGGAAGATCAAGCATAGGAACCTTGTACCTCTCTTGGGATACTGTAAGGTAGGAGAGGAGAGGCTTCTTGTCTATGAGTTCATGGCATATGGTAGTTTGGAAGACATGCTCCACACAAAAGGGAAAGGGAAAGATCGCAGAATCCTAACTTGGGAAGAGAGGAAGAAAATTGCTCGAGGAGCTGCTAAGGGGCTTTGTTTCCTTCACCACAATTGCATACCACACATTATTCACCGCGACATGAAATCTAGCAACGTCTTGCTTGATGATGAAATGGAGGCTAGGGTGTCAGATTTTGGCATGGCAAGGCTAATTAGTGCTCTTGACACTCACTTAAGTGTGAGCTCATTGGCCGGAACTCCAGGCTATGTACCACCTGAGTACTACCAGAGTTTTCGTTGCACTGCAAAGGGTGACGTGTACTCATTTGGGGTCGTCCTGTTAGAGCTCCTGACAGGGAAGAGACCGACAGACAAGGATGATTTCGGAGACACCAATTTGGTTGGATGGGTGAAGATGAAAGTAAGGGAAGGGAAAGGAATGGAAGTGATCGACCCCGAGTTGCTCTTGGTTACCAAAGGAACAGATGAATTAGAAGCAGAAGAAGTAAAAGAAATGGTGAGGTACTTAGATATTACAATGCAATGTGTAGATGATTTCCCTTCCAAGAGGCCTAATATGTTGCAGGTTGTTGCCATGTTGAGGGAGCTAGTTCCGGGATCATCAAGCTCGAGCCACAGTGCCTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_162746.p1 GENE.S_Transcript_162746~~S_Transcript_162746.p1 ORF type:complete len:1106 (+),score=247.94,LRR_8|PF13855.2|0.018,LRR_8|PF13855.2|1.2e-06,LRR_8|PF13855.2|0.00057,LRR_8|PF13855.2|6.3e-09,LRR_8|PF13855.2|1.5e-06,LRR_8|PF13855.2|0.062,LRR_8|PF13855.2|1.1e-07,LRR_8|PF13855.2|8.8e-06,LRR_8|PF13855.2|1.5e-07,LRR_8|PF13855.2|0.0055,Pkinase_Tyr|PF07714.13|7.2e-44,Pkinase|PF00069.21|3.2e-43,LRR_4|PF12799.3|0.29,LRR_4|PF12799.3|0.74,LRR_4|PF12799.3|0.31,LRR_4|PF12799.3|0.0011,LRR_4|PF12799.3|0.00097,LRR_4|PF12799.3|0.012,LRR_4|PF12799.3|0.28,LRR_4|PF12799.3|0.0027,LRR_4|PF12799.3|2.8,LRR_4|PF12799.3|0.0019,LRR_4|PF12799.3|2.2,LRR_4|PF12799.3|5.7e+03,LRR_1|PF00560.29|8,LRR_1|PF00560.29|6.8,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|67,LRR_1|PF00560.29|14,LRR_1|PF00560.29|27,LRR_1|PF00560.29|7.2,LRR_1|PF00560.29|1.1e+03,LRR_1|PF00560.29|17,LRR_1|PF00560.29|4.8e+02,LRR_1|PF00560.29|8.5e+02,LRR_1|PF00560.29|2.9e+02,LRR_1|PF00560.29|8.8,LRR_1|PF00560.29|46,LRR_1|PF00560.29|0.15,LRR_1|PF00560.29|0.77,LRR_1|PF00560.29|64,LRR_1|PF00560.29|1.5e+02,LRRNT_2|PF08263.8|2.4e-09 S_Transcript_162746:451-3768(+)
MKSTTTPFHIFFQISILCMAFSCLAKTPLNDAEALLTFKKMIDNTEELSNWQITKKTPVCTWEGVNCSSEGRVTQLDLNWRFLKGNIVSFEPFSSLDKLSYLDLSGNSFVINSSVSLFQLPPSIEQLYLSSLGVEGVIPENFFTNFPNLNTLDLSQNNLTGSLSENFLCTSSKVQALDLSANRLSGGIPVIGGNTTCGATIQTLNLSTNHFSGKIPSGLRNLSGLQKLDLSHNYLTGSVELGQVCESLVELHLAYNNLTGSVPDSLGSCKWLQFLDLSNNNLTGPFSGQALQGLESLEVLVMTNNVITGRFPGAVSNCPKLRVVDFSSNRLSGSIPPDLCSGESSLEELRLPDNLMTGKIPPELSKCSNLRTVDFSLNYLNGSIPSELGNLQNLEQFFAWYNELEGEIPPEIGQCSKLKDLILNNNKLSGEIPKELFRCSNLEWISLSSNQLTGHIPKEFGQLQRLAVLQLGNNSFFGEIPTQLGDCRTLVWLDLNSNNLTGEIPPRLGRQQGNPKIYGILSGNTLVFVRNIGNTCKGVGGLLEFAGIRPERLLQVPSLKNCDFTRMYSGAILSLFTQYETLEYLDLSYNQLHGKIPDEFGDMVALQVLEISHNQLSGEIPASLGNLKNIGVFDASYNRLQGEIPDSFSNLSFLVQIDLSNNQLTGQIPQRGQLSTLPASQYANNPGLCGVPLPECKDVGGAGGSNQVADGSEGGKRKSSGSFWTNSIVLGVLISIASVCILVVWMIAMRARRKEAEEAKMLHSLQASHAATTWKIDKEREPLSINVATFQRQLRKLKFSQLIEATNGFSAASLIGCGGFGEVFKATLKDGSSVAIKKLVRLSCQGDREFMAEMETLGKIKHRNLVPLLGYCKVGEERLLVYEFMAYGSLEDMLHTKGKGKDRRILTWEERKKIARGAAKGLCFLHHNCIPHIIHRDMKSSNVLLDDEMEARVSDFGMARLISALDTHLSVSSLAGTPGYVPPEYYQSFRCTAKGDVYSFGVVLLELLTGKRPTDKDDFGDTNLVGWVKMKVREGKGMEVIDPELLLVTKGTDELEAEEVKEMVRYLDITMQCVDDFPSKRPNMLQVVAMLRELVPGSSSSSHSA*

Click here to download the sequence:
Link to NCBI Protein BLAST