Transcript Information: S_Transcript_162993.p1


Annotated TAIR IDAT1G16040.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI biosynthesis protein Pig-F (InterPro:IPR009580); Has 280 Blast hits to 280 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 111; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:5504747-5506456 | Forward length=226
E-Value7E-15
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.70034213776791
Replicate 20.58059972519776
Replicate 31.5773392703079
Condition 2: 8 Hour
Replicate 12.5253751691342
Replicate 21.1774657178804
Replicate 30.84141503703874
Condition 3: 24 Hour
Replicate 11.1497307100313
Replicate 20.4473120705858
Replicate 30.33186900533047


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_162993.p1 GENE.S_Transcript_162993~~S_Transcript_162993.p1 ORF type:5prime_partial len:152 (+),score=3.53 S_Transcript_162993:2-457(+)
GAAGATTTATCGCCGTCGCCGACTCGCCGTTGCAAGATCAACACCAAGAACACAGATAGAAGATCAGGAACTATTCATTTGCACATTTCGGTTGATTGGTTTTGGAATGTGACGGTGATGTCATCAACATTTGGTGTTTTATCGTTGCATTTGTTATGTGGATTGGGTTTAGGGTCAGCATTCTTAGTGGCCAATCATATCTACCATGTCAATTTAATCTCCGATCCCGAAACTGTGCTGCTTATATGTTGGGTCATTGAGTGCCCAATTGTAACCCTAATTTATAGTCGTTTTAGGAAAAATCCAGCAAAATGCTCGTATTTGAAGGCGGTAGGACGGGGGCTATTGGGGCTTGTTGCAGCAAATGGCATGGTCCGACACCTATATACGTGTTTGCGTCGGACAACTCTAGTCGAGTCTGAGAAACATAGATGGCATGCAATCCCTTGGGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_162993.p1 GENE.S_Transcript_162993~~S_Transcript_162993.p1 ORF type:5prime_partial len:152 (+),score=3.53 S_Transcript_162993:2-457(+)
EDLSPSPTRRCKINTKNTDRRSGTIHLHISVDWFWNVTVMSSTFGVLSLHLLCGLGLGSAFLVANHIYHVNLISDPETVLLICWVIECPIVTLIYSRFRKNPAKCSYLKAVGRGLLGLVAANGMVRHLYTCLRRTTLVESEKHRWHAIPWA*

Click here to download the sequence:
Link to NCBI Protein BLAST