Transcript Information: S_Transcript_162996.p1


Annotated TAIR IDAT1G16040.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI biosynthesis protein Pig-F (InterPro:IPR009580); Has 280 Blast hits to 280 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 111; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:5504747-5506456 | Forward length=226
E-Value6E-28
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.85848391081227
Replicate 20.71170288895209
Replicate 31.1898539408775
Condition 2: 8 Hour
Replicate 12.5223579944996
Replicate 22.2852963664237
Replicate 32.4066279554011
Condition 3: 24 Hour
Replicate 11.1744561016449
Replicate 21.827726740028
Replicate 31.7628310605726


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_162996.p1 GENE.S_Transcript_162996~~S_Transcript_162996.p1 ORF type:internal len:186 (+),score=9.77,PIG-F|PF06699.7|1.8e-15 S_Transcript_162996:2-556(+)
GAAGATTTATCGCCGTCGCCGACTCGCCGTTGCAAGATCAACACCAAGAACACAGATAGAAGATCAGGAACTATTCATTTGCACATTTCGGTTGATTGGTTTTGGAATGTGACGGTGATGTCATCAACATTTGGTGTTTTATCGTTGCATTTGTTATGTGGATTGGGTTTAGGGTCAGCATTCTTAGTGGCCAATCATATCTACCATGTCAATTTAATCTCCGATCCCGAAACTGTGCTGCTTATATGTTGGGTCATTGAGTGCCCAATTGTAACCCTAATTTATAGTCGTTTTAGGAAAAATCCAGCAAAATGCTCGTATTTGAAGGCGGTAGGACGGGGGCTATTGGGGCTTGTTGCAGGGGCGATGGTGATTGCACTGGGAGCTATTACATTGGGTGCACCCGTTGGCGCAAAATATCTGTGGAGGACACTATACTGGTCCCTTCTGATGTCATTGTTTACATTTGCACCTGCTGCATCCGTTTTTGGTTCATCTTGGGTAGATTGGCAACGTATATTTGCAGACACCAGGCCAGCTGGATGTGTTGATTAT

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_162996.p1 GENE.S_Transcript_162996~~S_Transcript_162996.p1 ORF type:internal len:186 (+),score=9.77,PIG-F|PF06699.7|1.8e-15 S_Transcript_162996:2-556(+)
EDLSPSPTRRCKINTKNTDRRSGTIHLHISVDWFWNVTVMSSTFGVLSLHLLCGLGLGSAFLVANHIYHVNLISDPETVLLICWVIECPIVTLIYSRFRKNPAKCSYLKAVGRGLLGLVAGAMVIALGAITLGAPVGAKYLWRTLYWSLLMSLFTFAPAASVFGSSWVDWQRIFADTRPAGCVDY

Click here to download the sequence:
Link to NCBI Protein BLAST