Transcript Information: S_Transcript_162999.p1


Annotated TAIR IDAT1G16040.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: GPI anchor biosynthetic process; LOCATED IN: integral to membrane, endoplasmic reticulum membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GPI biosynthesis protein Pig-F (InterPro:IPR009580); Has 280 Blast hits to 280 proteins in 133 species: Archae - 0; Bacteria - 0; Metazoa - 113; Fungi - 111; Plants - 44; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr1:5504747-5506456 | Forward length=226
E-Value4E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.52182355363099
Replicate 20
Replicate 30.90405569037258
Condition 2: 8 Hour
Replicate 10
Replicate 20.21933184940908
Replicate 30.20897889808805
Condition 3: 24 Hour
Replicate 10.21416552441759
Replicate 20.66658269342198
Replicate 31.236374725741


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_162999.p1 GENE.S_Transcript_162999~~S_Transcript_162999.p1 ORF type:internal len:102 (-),score=4.54 S_Transcript_162999:2-304(-)
GCCGTTTCCAGTTTCCGAAACAAATCTGATAGAAGATCAGGTACTATTCATTTGCAAATTTCGGTTGATTGGTTTTGGAATGTGACGGTGATGTCATCAACATTTGGTGTTTTATCGTTGCATTTGTTATGTGGATTGGGTTTAGGGTCAGCTTTCTTAGTGGCCAATCATATCTACCATGTCAATCTCATCTCGGATCCCGAAACTATGCTGCTTATATCTTGGGTCATAGAGTGCCCAATTGTAGCCCTACTTTATAGTCTTTTCAGGAAAAATCCAGCAAAATGCTCGTATTTGAAGGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_162999.p1 GENE.S_Transcript_162999~~S_Transcript_162999.p1 ORF type:internal len:102 (-),score=4.54 S_Transcript_162999:2-304(-)
AVSSFRNKSDRRSGTIHLQISVDWFWNVTVMSSTFGVLSLHLLCGLGLGSAFLVANHIYHVNLISDPETMLLISWVIECPIVALLYSLFRKNPAKCSYLKA

Click here to download the sequence:
Link to NCBI Protein BLAST