Transcript Information: S_Transcript_163125.p1


Annotated TAIR IDAT5G58920.1
Annotated Gene Nameunknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:23793239-23794014 | Forward length=162
E-Value6E-82
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.448326597833
Replicate 22.7015660682671
Replicate 32.2582942143184
Condition 2: 8 Hour
Replicate 13.6267670607369
Replicate 22.7394100375175
Replicate 33.3351326184665
Condition 3: 24 Hour
Replicate 13.4179069407052
Replicate 22.7751606011854
Replicate 32.9168350672583


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163125.p1 GENE.S_Transcript_163125~~S_Transcript_163125.p1 ORF type:5prime_partial len:147 (-),score=40.07 S_Transcript_163125:220-660(-)
CGGGTGGCGGTGCGGCCTAAGATGCTGAAAAAGGTGGGCTTAGGCAAGGAAGATTGGCACTTTTGGAAGCAAGTCGGCAAGGCATTGTTATGCACGTACGCAGTTTTTGGGGCAGTGTGGCTTTACAATGAGACTTCCCCATTGGGTTGGTGGACTCTCAAGCCTCGTCCGAAGGAAGAGAAGGAGTTGGCACACTTGTATGAAAGGCGAGAATTCCCATACCCGGGTGACAAGGAAGCAATGGAAGAGTTTGTTGCCAAGGGTGGGATGATCGGTACCACCATTGGCCCCAAAGGGATGGTCGAAACTGATAAGGATTCGTTCAACCATCAGAAGGCATTGCAGGATAAGAAGCTTGAGCAGGAGGCTCAGAAGCTTTGGTTCAGGATGAGGAATGAGGTCATTGCCGAGCTTCAAGAAAAAGGTTTTGATGTTGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163125.p1 GENE.S_Transcript_163125~~S_Transcript_163125.p1 ORF type:5prime_partial len:147 (-),score=40.07 S_Transcript_163125:220-660(-)
RVAVRPKMLKKVGLGKEDWHFWKQVGKALLCTYAVFGAVWLYNETSPLGWWTLKPRPKEEKELAHLYERREFPYPGDKEAMEEFVAKGGMIGTTIGPKGMVETDKDSFNHQKALQDKKLEQEAQKLWFRMRNEVIAELQEKGFDVE*

Click here to download the sequence:
Link to NCBI Protein BLAST