Transcript Information: S_Transcript_16313.p1


Annotated TAIR IDAT3G10300.3
Annotated Gene NameCalcium-binding EF-hand family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:3186436-3188071 | Forward length=335
E-Value1E-62
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 123.713530283488
Replicate 253.568796435367
Replicate 344.922773495463
Condition 2: 8 Hour
Replicate 138.252937494935
Replicate 247.268147125959
Replicate 347.939921850892
Condition 3: 24 Hour
Replicate 153.974712126565
Replicate 251.236087649252
Replicate 332.091861947366


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16313.p1 GENE.S_Transcript_16313~~S_Transcript_16313.p1 ORF type:5prime_partial len:257 (+),score=27.15,EF-hand_6|PF13405.2|6.2e-05,EF-hand_6|PF13405.2|3.9e-07,EF-hand_6|PF13405.2|6.8e+03,EF-hand_1|PF00036.28|0.0004,EF-hand_1|PF00036.28|7.9e+03,EF-hand_1|PF00036.28|6.2e-07,EF-hand_1|PF00036.28|2.2e+03,EF-hand_5|PF13202.2|0.0026,EF-hand_5|PF13202.2|0.00016,EF-hand_7|PF13499.2|0.018,EF-hand_7|PF13499.2|0.00033,EF-hand_8|PF13833.2|0.15,EF-hand_8|PF13833.2|0.12,EF-hand_8|PF13833.2|8.4e+03 S_Transcript_16313:1-771(+)
TCTTTCTTCAAAAATTTCAAACTCATCATATTTTGCCCATATTTTTACATTAAGCTACCAACTTACCTACAACACAAAATGCAACTCTACAGATACCAGCAGCAGGATGCTTTTCAACAACAGCAAAGCTCCTACAGCAGCAACTACAATAAGCCACAGCCACAGCCACAGCCGTACTCGTACTCGTCGTCGCCGACAGTTTACGGGGCATCGGACCCATTTTGCGAGATTATGCCGTCGGCCTTTCCTCCGGGGACCGACCCGAGGGTGGTGGAGTGCTTCAACCGGATCGACAGGGACGGAAACGGCCTCGTCGACGATAAGGAGCTCCAGGCCGTGCTTTCCTCCTGCAGCCAGTCCTTCAGCCTGAGGACTGTTCATCTCCTCATGCATGAGTTTACCCACAGCAATAAGAGGGTCATAGGTCCAAGGGAGTTTGTCCCACTACTCACTTCCCTGCAGCGATGGAAGTCAATGTTTCAGAGGTTTGATAGGGACAGAAATGGAACAATTGATGCAAGAGAATTGGGCCAAGCTCTCACTACCTTGGGCTACTGTGTTTCTCCTACAATTGTCAATCTGCTTATTGCTAAGTTCAACAAATCTGGTGGAACCTGGTTTTGTCTCCCATATGACAACTTCATCGAGTGTGTCCTTACGGTTAAGGGCTTGACTGAGACATTTAGGGCCAAAGATAGGGATAATTGTGGCAAAGCAACCTTCTATTATGAGGAGTTCTTGCTGAGTGTTTTGCCCTTCATCATTGCATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16313.p1 GENE.S_Transcript_16313~~S_Transcript_16313.p1 ORF type:5prime_partial len:257 (+),score=27.15,EF-hand_6|PF13405.2|6.2e-05,EF-hand_6|PF13405.2|3.9e-07,EF-hand_6|PF13405.2|6.8e+03,EF-hand_1|PF00036.28|0.0004,EF-hand_1|PF00036.28|7.9e+03,EF-hand_1|PF00036.28|6.2e-07,EF-hand_1|PF00036.28|2.2e+03,EF-hand_5|PF13202.2|0.0026,EF-hand_5|PF13202.2|0.00016,EF-hand_7|PF13499.2|0.018,EF-hand_7|PF13499.2|0.00033,EF-hand_8|PF13833.2|0.15,EF-hand_8|PF13833.2|0.12,EF-hand_8|PF13833.2|8.4e+03 S_Transcript_16313:1-771(+)
SFFKNFKLIIFCPYFYIKLPTYLQHKMQLYRYQQQDAFQQQQSSYSSNYNKPQPQPQPYSYSSSPTVYGASDPFCEIMPSAFPPGTDPRVVECFNRIDRDGNGLVDDKELQAVLSSCSQSFSLRTVHLLMHEFTHSNKRVIGPREFVPLLTSLQRWKSMFQRFDRDRNGTIDARELGQALTTLGYCVSPTIVNLLIAKFNKSGGTWFCLPYDNFIECVLTVKGLTETFRAKDRDNCGKATFYYEEFLLSVLPFIIA*

Click here to download the sequence:
Link to NCBI Protein BLAST