Transcript Information: S_Transcript_163279.p1


Annotated TAIR IDAT5G43490.1
Annotated Gene Nameunknown protein; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:17468471-17469256 | Reverse length=185
E-Value5E-14
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.5353346156417
Replicate 24.1855452858308
Replicate 31.3046308483576
Condition 2: 8 Hour
Replicate 14.1142232123086
Replicate 25.395140347201
Replicate 31.9191116814774
Condition 3: 24 Hour
Replicate 15.9002257659483
Replicate 24.0080695713798
Replicate 33.4061924920093


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163279.p1 GENE.S_Transcript_163279~~S_Transcript_163279.p1 ORF type:complete len:311 (-),score=78.19 S_Transcript_163279:235-1167(-)
ATGATAGAAAAGGAAACAAATGGAAGGATAGAGAAAAGCCGATCCACAGGGATAAGGACAGGGAAAGACAAGCTCAGAGAAAAAGAAGGTGATGATAGAAAAGGAAACAAATGGAAGGATAGAGAAAAGCCGATCCACAGGGATAAGGATAGGGAGAAGGAAAAGAAGAAAGAGGAGAAAGTGAAGGCAACAAGTGAACAGAAGCATATAGACCAGTCACAAATAAAAGACAGCAGTGATAACCACATGCTGACGTTTAGTGTAAAGGATGGAATCAAGAAGGAATTTTCAAGTGCCCCAAATGCTGGAACTCAGAAAATACCTAAAGAGAGCCATCATGTTGTTGCTCCTAATAATCTTGGGAAACGGAAGGACATTGGGCTCAATGGAATTGATGATGAGCATAGCACTGGGCCTCATAAGCTGGCAAGAACCACGGCCTCCCCTCATCCATTGACAGAGAATGGAAGGAGCTTAGAGCCTTGCCAGAATTCTGCTGCCTTAGCTCCTGGTACACAGCGCCCACCTATGAACATTAAAGTGGAGCGTACCTTTGCTCCTGATGATACGCAGAGGCCTCCCACGAATATTAAAGTGGATGGCAAGGAGCGCAAGATTAATGGCATAATTTCTCAGCCAGTTACACAGCAGCCTTCTCAAACGAGTGCCAAAGCAGAGCAAAAATCGGTTGCTCCCTCAAAGCCGCCTCATCCAGATATCAAGTATCTCAGCCAGGTACTCTCGGTGCCTAAAGTGGATGATTGGTCTGATTTCGATGACCAAGAGTGGTTGTTTAACAGCTCTAGCTCCCAAACAAGGACGCTGGAAGCCGAATCTTCTGGTATTGACAAGCCACAACAGCAGGTATGGGCAAAAGCCTTGTGGTTAGAGCCAGTTGATTTTTACGCATTGCCATATGTCATTCCTCATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163279.p1 GENE.S_Transcript_163279~~S_Transcript_163279.p1 ORF type:complete len:311 (-),score=78.19 S_Transcript_163279:235-1167(-)
MIEKETNGRIEKSRSTGIRTGKDKLREKEGDDRKGNKWKDREKPIHRDKDREKEKKKEEKVKATSEQKHIDQSQIKDSSDNHMLTFSVKDGIKKEFSSAPNAGTQKIPKESHHVVAPNNLGKRKDIGLNGIDDEHSTGPHKLARTTASPHPLTENGRSLEPCQNSAALAPGTQRPPMNIKVERTFAPDDTQRPPTNIKVDGKERKINGIISQPVTQQPSQTSAKAEQKSVAPSKPPHPDIKYLSQVLSVPKVDDWSDFDDQEWLFNSSSSQTRTLEAESSGIDKPQQQVWAKALWLEPVDFYALPYVIPH*

Click here to download the sequence:
Link to NCBI Protein BLAST