Transcript Information: S_Transcript_163308.p1


Annotated TAIR IDAT5G55820.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Inner centromere protein, ARK-binding region (InterPro:IPR005635); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:22586287-22594035 | Forward length=1826
E-Value1E-77
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.39479839998245
Replicate 20.56533108778527
Replicate 30.58449669314176
Condition 2: 8 Hour
Replicate 10.94907333845636
Replicate 20.60342140633113
Replicate 30.77616707395077
Condition 3: 24 Hour
Replicate 10.45663613500231
Replicate 20
Replicate 30.28912660477881


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163308.p1 GENE.S_Transcript_163308~~S_Transcript_163308.p1 ORF type:complete len:1483 (+),score=381.05,INCENP_ARK-bind|PF03941.11|1.8e-08 S_Transcript_163308:165-4613(+)
ATGGCGAAGATAGAGAAGCTGTTCGTACAGATCTTCGAGAGAAAGAGGTGGATAATCGAACACTTGAATCAACAAAAACAACTCTACGACCAACACCTCGCTTCCAAGCTCCTAATTCAAGGAATCACTCCACCTCCTTGGCTTCTCAGTCCTCAATTTCCTTCTTCTACTTGTTCGGATCTCACTGAGTTAAATAAAGAGGAGCTTATTTCTGGAATACTACTGCCACGGCCTGGAACTTTGGCCACTTATCCCAGTGGACCTTGCTTTGTGTATGATAGACCAGTTGCAAAAGCAGCTAATGATGATCAACGGCATGAGACTTGTACGAGAACATGTGCCTCCAGCACTGGTTTTGATGCTAATGACCCTGGCATTGTTCCAACATGCCGTGTTCATCAAATGGAAGATGAGCTTGGTGTTGTTCACCCAAGTCGTGTTGATGGCACGGAAGACATGGTCAATTATGTTCCTATGTCTCCAGAGGATCAAACAGATTTAATAGTCTCAAGCACCTACTCTAAGGCGGAACAGTCACTAGCACGGATACAGAGGTCCAGATCCCGTCAGAAGGCTTTGGAGCTTAGGAATAGTGCAAAAGCAAGCGCTAAATGTCACTTAGGGAAGGAAGATGATGCTGGTAAAATTTCTGAAACCAGATCATGTAGAGAAGGTCAGCAACTTGATGGCCTGAGGGAATCTCTTGAATTGGTCAAGTCTTCAACATTGTCTGCTGAACCTTGTAGTAAAGAAGAAGCTGCAGCAGGAGATTGCTCAGACAAGGGGAGGAGTGAGGCCCATTGCAAGAAAACCTCACGTTCTGGACATAATGAGGCCGAAGTACAATCTTTAAATCATGAGAAGAAGAAAGAGAAGAGCAACAATTATGGTGAACAAAATACTAGTTCCAGAAGATGCTGCCCACAGTTCATTACTGAAGATTACCACAATGATAGAAAGAGCCGTGAGGTTTATCTGGGTAGAATAACTAGATCTAGAAGTGGCAATGCACGACAGCCAGAAACTAGTGATCCTCAAAATCAAAGAATCACAAGATCTAAGAGCTGCAACACTCAATTCATTAATGCAGATCACGCTATCAGGAGCAGCAAGGTGTATTGCGGTAGAATCACAAGATCAAAAAGTTGTGGCGCAAAACAAGCAGAAAAATGGGATAATGGGAGCAGGACTAAGAATGACATGTCTGTGAAGCCTAAGCAGCTTGACTTTGATGAGGTTGAAGAAAGTTGTTTGTCTGATTTTCCTGCTAAAGGCCAGGACAAACCAGAAGAGAAGACTACTCTCAACGTCGCAGAATGTTCAGCTTCTACTCCTTGCGCAATATCTACTGAACTATTTTCTGAACCACATGTTGAGTCATTTGCATGTGAAACACTGGAGATCTTTGATGGTGAAGCTGTTCGCTTGTTCCCTGGTAGTGACAGAACATCAGGAAAGACTTCTTTCATGCCAGATTGTCTTCCTGATTCACAAGTAACTCAAGAGTGTCTGTTAGGCAACACAGTGGACCATGCTTCAGATCCTAACTCATCTGGACCAAATGCAGATAGAATGGCAGAAATATCATCTCAAAAGCATACATGTGAGCCTGATGGGGCATCTGTTGGCCTTGCTGATTCACGAGAAACTCAGGAGCATCTGTTAGGAAACACAGAGGAATATGCTTCAGATCTTAACTCATCCAGACCAGATGCAGATGGAGGCGCAGCATCATTTTCATCTCAAAAGCATACATCATTGTCATCTGTTTCCCTTGCTGATTCACAAGTAAGTCAAGAGCATCTTGTAGGAAACACAGTGGCAAATGTTTCCTCATCAAGAACAGGTGCAGATGGAGCGGCAGAATTGTCGTCTCAAAAGCAAACATTTGAGCCTAAAGGACCGTCAATTGGGCTTGTTGGTGGTTCTAAATTACCAGAACTTTGGGCTGCACTTAATGTTCTTCCAGAACACAACTTTAGGGATGCCAATGGTTCTTGGCCTTGCTATAAGCGGAGGAGGATTGGATATGAACTCTTTAACAAATCTGCTAGCCCGAGTGTAAGAGTGAATCCTTTTGTTTCTAAGGAAAGCATCCCAAGGAATTCTTCAGCAGGTGGGGCCGATAACTCTTCCCATATTTTGCAGAAGTCTATTACTTCTCAGGAGCTAAATGACATGTTATCCAATGTTGACTTTTCTGCTGTTGAGACTCATCAGAGTGGCAAATGTTCTCTCAATAAGGAATCTGGTCTGACTCCAGAGGTCAAAAAGGGTGAAGTTGACTTAGAAAGAAGTGTTATGATGCCCTTAACATGTGAACATAAAAATTCATCAACATCTTACGACTCAAAGTGGAAAACTGCAGAACCCTCGGACTGTTTTTCAGATGAAGGAGAATTGAGAGCAGATCCAGAAAGTGCTATTCTTTTCAAGGGACTGGTGTGCAGTGATTTAGAATGTGCTGCTGATGTGGCTGATCATAATGCTGGGGAAAAGTCAACTTCTACTAAAATTGTTGTAGAACCAAGACAATATTTTCATGAAGTAGATGCATTTACGTTTTCAGTTGGGTCACCGGTCATTGAGCAGATGGATGCTTGTGTATCCAATGCCGATGAGATTGCGCCAGAGTTTACAAGTTTCATCATTGCTGAGAAAGAGGATAGTGAACAAAGTGCTGCAGTAAAACCCATACAAGGTGAACTCCCATTTATGGGTGACATCACAGAAAAAACGAGTTTGCCTGGGAAAATGTGCAGAGCTGCAAGCTTGAGTACTCCTGCATCCCCTTTTCCTAGTTCATACAAATTGCACCTGACACCAGGTGTATACCGCTCAGTACCAAAGGGGCTTCTAGAGAACATTGATTTAGCAAGTAACCAGCTGTCCCATGGTAGTGCTTTGGAGGAAAAATCTTATTCTGATTACTACTCGTTTCCTGGCAGTCGACTTAACTGGGATATTGGTAAACCTTTCATTTCTCCTGTAGGAGAGGGGTTGGAAGAGATCAAATCTAAATCTGGTGGCTCAAACAAGCGAGTTAGTGGCAATCCCGAACTTGTTTGCTTCCCCATTCAGGAAGATCCTGAAAGCAGCGAGGAAGATGTGAATGTAAATACCATGGCCGATATGAGCATGAAGAGAATGGATTCATCTCTGAAAAGAAGCTCCATTAGAGAACCACTGCGTGACATTACTGAAAAGAATGAAGGTATTTTGGATCCAACTCATGAAGTTGAGAGGGGTAGTTTAGAATCTGTAAGTACAGAAATCAGTGTGAGTGAGATGCATAATGAATACACTAAAAAGAATGAAACGCATCATCAAAGCAGACAGAGAAAGCAAGGAAAAGAGAACCAGAGTTTGTCAATTGGTGTGAACAGCATAATGAAGCACTCTACATCATGTAGTATTCGGCATAGCAAACCAAAGCTATCTGGAAAATCTAGCTTGAGAAGCAGAGGGCAAAGTCTGTCAGAGAAGGATCCAAGATGCAGTAACCTTAGTAGAGCGCAAAGTTTGTCGGAGAAGGAACCAAGACGCAATAACATTGTGTCCAATGTGAAATCCTTTGTTTCACTCGTTCAACAAAAACAGGCAGCTGCAGCTGTCCCTGCAAAGAGAGATGTAAGAATCAAGGCTCTGGAAGCAGCAGAGGCTGCCAAGCGTCTTGCAGAAAAGAGAGAGAATGAACGGAAGCAGAAGAAAGAAGTGCTGAAACTTGAGCGTGCAAGAGTAGAGCAAGAAAATTTGAAGCAAATGGAACTAAAGAAAAAATTGAAAGAAGAGGAAAAGAAGAAACGAGATGCTGAGAATGCAGCAAGGAAAAGACAGAGAGAAGAAGAAGAGAGAAAAGAGAAGGAAAAGAAAAGAAAACGCATTGAAGAAGCCCGATGTCATAAAAAGGAAGCAGAAGACAAGATTCATGCTTGGAAGGAGGAATCGAAATGTGGAACTCAGGATGGGAGAGAGCGTGAAAAGGACTTTAGCAACGAACTAGAAAATCAAGTTGACAGAGAAGCGGAAAATATTCCAAGAAAGCCATTGACAGAAGAGGTTGGAACTGAGAGAATAGAAGCTGATTCTGCGATTCCCACCATTGACAATAAAACTTCTACTTGTTCTTCTGATACTGGAAAGGTAGCGAGCATAGGTGTTGCTGAATTCTCAACACCTAGTTGTGATAAAACCAACCAGCCCAGTAGCCATACAAGCCAAGAACAGTCGTATGATATATCACCATACCAATGTTCGGATGATGAAGAGGAAGAAGAAGAAGAAATACCAAACAAGAAGTTTATCCCAACATGGGCCAGTAAAAGTCGTGTGGCAGTGGCATTATCCTCTCTGAAACAATTTGATCCCGATTCAATATTCACTCCTGGAAGCTTTTGCAGTTTGGAGGAAGTTCTTTTACCCAGAAGGCTACCACAGAAACAGGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163308.p1 GENE.S_Transcript_163308~~S_Transcript_163308.p1 ORF type:complete len:1483 (+),score=381.05,INCENP_ARK-bind|PF03941.11|1.8e-08 S_Transcript_163308:165-4613(+)
MAKIEKLFVQIFERKRWIIEHLNQQKQLYDQHLASKLLIQGITPPPWLLSPQFPSSTCSDLTELNKEELISGILLPRPGTLATYPSGPCFVYDRPVAKAANDDQRHETCTRTCASSTGFDANDPGIVPTCRVHQMEDELGVVHPSRVDGTEDMVNYVPMSPEDQTDLIVSSTYSKAEQSLARIQRSRSRQKALELRNSAKASAKCHLGKEDDAGKISETRSCREGQQLDGLRESLELVKSSTLSAEPCSKEEAAAGDCSDKGRSEAHCKKTSRSGHNEAEVQSLNHEKKKEKSNNYGEQNTSSRRCCPQFITEDYHNDRKSREVYLGRITRSRSGNARQPETSDPQNQRITRSKSCNTQFINADHAIRSSKVYCGRITRSKSCGAKQAEKWDNGSRTKNDMSVKPKQLDFDEVEESCLSDFPAKGQDKPEEKTTLNVAECSASTPCAISTELFSEPHVESFACETLEIFDGEAVRLFPGSDRTSGKTSFMPDCLPDSQVTQECLLGNTVDHASDPNSSGPNADRMAEISSQKHTCEPDGASVGLADSRETQEHLLGNTEEYASDLNSSRPDADGGAASFSSQKHTSLSSVSLADSQVSQEHLVGNTVANVSSSRTGADGAAELSSQKQTFEPKGPSIGLVGGSKLPELWAALNVLPEHNFRDANGSWPCYKRRRIGYELFNKSASPSVRVNPFVSKESIPRNSSAGGADNSSHILQKSITSQELNDMLSNVDFSAVETHQSGKCSLNKESGLTPEVKKGEVDLERSVMMPLTCEHKNSSTSYDSKWKTAEPSDCFSDEGELRADPESAILFKGLVCSDLECAADVADHNAGEKSTSTKIVVEPRQYFHEVDAFTFSVGSPVIEQMDACVSNADEIAPEFTSFIIAEKEDSEQSAAVKPIQGELPFMGDITEKTSLPGKMCRAASLSTPASPFPSSYKLHLTPGVYRSVPKGLLENIDLASNQLSHGSALEEKSYSDYYSFPGSRLNWDIGKPFISPVGEGLEEIKSKSGGSNKRVSGNPELVCFPIQEDPESSEEDVNVNTMADMSMKRMDSSLKRSSIREPLRDITEKNEGILDPTHEVERGSLESVSTEISVSEMHNEYTKKNETHHQSRQRKQGKENQSLSIGVNSIMKHSTSCSIRHSKPKLSGKSSLRSRGQSLSEKDPRCSNLSRAQSLSEKEPRRNNIVSNVKSFVSLVQQKQAAAAVPAKRDVRIKALEAAEAAKRLAEKRENERKQKKEVLKLERARVEQENLKQMELKKKLKEEEKKKRDAENAARKRQREEEERKEKEKKRKRIEEARCHKKEAEDKIHAWKEESKCGTQDGREREKDFSNELENQVDREAENIPRKPLTEEVGTERIEADSAIPTIDNKTSTCSSDTGKVASIGVAEFSTPSCDKTNQPSSHTSQEQSYDISPYQCSDDEEEEEEEIPNKKFIPTWASKSRVAVALSSLKQFDPDSIFTPGSFCSLEEVLLPRRLPQKQG*

Click here to download the sequence:
Link to NCBI Protein BLAST