Transcript Information: S_Transcript_163309.p1


Annotated TAIR IDAT5G55820.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Inner centromere protein, ARK-binding region (InterPro:IPR005635); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:22586287-22594035 | Forward length=1826
E-Value3E-33
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.5952786353952
Replicate 20.46677269867803
Replicate 30.20809857358083
Condition 2: 8 Hour
Replicate 10.24062499652618
Replicate 20.58375063446395
Replicate 30.70651963147681
Condition 3: 24 Hour
Replicate 10
Replicate 20.62333473305892
Replicate 30.7114822117099


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163309.p1 GENE.S_Transcript_163309~~S_Transcript_163309.p1 ORF type:complete len:1418 (+),score=360.24,INCENP_ARK-bind|PF03941.11|1.7e-08 S_Transcript_163309:165-4418(+)
ATGGCGAAGATAGAGAAGCTGTTCGTACAGATCTTCGAGAGAAAGAGGTGGATAATCGAACACTTGAATCAACAAAAACAACTCTACGACCAACACCTCGCTTCCAAGCTCCTAATTCAAGGAATCACTCCACCTCCTTGGCTTCTCAGTCCTCAATTTCCTTCTTCTACTTGTTCGGATCTCACTGAGTTAAATAAAGAGGAGCTTATTTCTGGAATACTACTGCCACGGCCTGGAACTTTGGCCACTTATCCCAGTGGACCTTGCTTTGTGTATGATAGACCAGTTGCAAAAGCAGCTAATGATGATCAACGGCATGAGACTTGTACGAGAACATGTGCCTCCAGCACTGGTTTTGATGCTAATGACCCTGGCATTGTTCCAACATGCCGTGTTCATCAAATGGAAGATGAGCTTGGTGTTGTTCACCCAAGTCGTGTTGATGGCACGGAAGACATGGTCAATTATGTTCCTATGTCTCCAGAGGATCAAACAGATTTAATAGTCTCAAGCACCTACTCTAAGGCGGAACAGTCACTAGCACGGATACAGAGGTCCAGATCCCGTCAGAAGGCTTTGGAGCTTAGGAATAGTGCAAAAGCAAGCGCTAAATGTCACTTAGGGAAGGAAGATGATGCTGGTAAAATTTCTGAAACCAGATCATGTAGAGAAGGTCAGCAACTTGATGGCCTGAGGGAATCTCTTGAATTGGTCAAGTCTTCAACATTGTCTGCTGAACCTTGTAGTAAAGAAGAAGCTGCAGCAGGAGATTGCTCAGACAAGGGGAGGAGTGAGGCCCATTGCAAGAAAACCTCACGTTCTGGACATAATGAGGCCGAAGTACAATCTTTAAATCATGAGAAGAAGAAAGAGAAGAGCAACGATTATGGTGAACATAATACTAGTTCCAGAAGCCGCTGCCCACAGTCCATTACTGAAGATTACCACAATGATAGAAAGAGCCGTGAGGTTTATCTGGGTAGAATAACTAGATCTAGAAGTGGCAATGCACGACAGCCAGAAACTAGTGATCCTCAAAATCAAAGAATCACAAGATCTAAGAGCTGCAACACTCAATTCATTAATGCAGATCACGCTATCAGGAGCAGCAAGGTGTATTGCGGTAGAATCACAAGATCAAAAAGTTGTGGCGCAAAACAAGCAGAAAAATGGGATAATGGGAGCAGGACTAAGAATGACATGTCTGTGAAGCCTAAGCAGCTTGACTTTGATGAGGTTGAAGAAAGTTGTTTGTCTGATTTTCCTGCTAAAGGCCAGGACAAACCAGAAGAGAAGACTACTCTCAACGTCGCAGAATGTTCAGCTTCTACTCCTTGCGCAATATCTACTGAACTATTTTCTGAACCACATGTTGAGTCATTTGCATGTGAAACACTGGAGATCTTTGATGGTGAAGCTGTTCGCTTGTTCCCTGGTAGTGACAGAACATCAGGAAAGACTTCTTTCATGCCAGATTGTCTTCCTGATTCACAAGTAACTCAAGAGTGTCTGTTAGGCAACACAGTGGACCATGCTTCAGATCCTAACTCATCTGGACCAAATGCAGATAGAATGGCAGAAATATCATCTCAAAAGCATACATGTGAGCCTGATGGGGCATCTGTTGGCCTTGCTGATTCACGAGAAACTCAGGAGCATCTGTTAGGAAACACAGAGGAATATGCTTCAGATCTTAACTCATCCAGACCAGATGCAGATGGAGGCGCAGCATCATTTTCATCTCAAAAGCATACATCATTGTCATCTGTTTCCCTTGCTGATTCACAAGTAAGTCAAGAGCATCTTGTAGGAAACACACGGAGGAGGATTGGATATGAACTCTTTAACAAATCTGCTAGCCCGAGTGTAAGAGTGAATCCTTTTGTTTCTAAGGAAAGCATCCCAAGGAATTCTTCAGCAGGTGGGGCCGATAACTCTTCCCATATTTTGCAGAAGTCTATTACTTCTCAGGAGCTAAATGACATGTTATCCAATGTTGACTTTTCTGCTGTTGAGACTCATCAGAGTGGCAAATGTTCTCTCAATAAGGAATCTGGTCTGACTCCAGAGGTCAAAAAGGGTGAAGTTGACTTAGAAAGAAGTGTTATGATGCCCTTAACATGTGAACATAAAAATTCATCAACATCTTACGACTCAAAGTGGAAAACTGCAGAACCCTCGGACTGTTTTTCAGATGAAGGAGAATTGAGAGCAGATCCAGAAAGTGCTATTCTTTTCAAGGGACTGGTGTGCAGTGATTTAGAATGTGCTGCTGATGTGGCTGATCATAATGCTGGGGAAAAGTCAACTTCTACTAAAATTGTTGTAGAACCAAGACAATATTTTCATGAAGTAGATGCATTTACGTTTTCAGTTGGGTCACCGGTCATTGAGCAGATGGATGCTTGTGTATCCAATGCCGATGAGATTGCGCCAGAGTTTACAAGTTTCATCATTGCTGAGAAAGAGGATAGTGAACAAAGTGCTGCAGTAAAACCCATACAAGGTGAACTCCCATTTATGGGTGACATCACAGAAAAAACGAGTTTGCCTGGGAAAATGTGCAGAGCTGCAAGCTTGAGTACTCCTGCATCCCCTTTTCCTAGTTCATACAAATTGCACCTGACACCAGGTGTATACCGCTCAGTACCAAAGGGGCTTCTAGAGAACATTGATTTAGCAAGTAACCAGCTGTCCCATGGTAGTGCTTTGGAGGAAAAATCTTATTCTGATTACTACTCGTTTCCTGGCAGTCGACTTAACTGGGATATTGGTAAACCTTTCATTTCTCCTGTAGGAGAGGGGTTGGAAGAGATCAAATCTAAATCTGGTGGCTCAAACAAGCGAGTTAGTGGCAATCCCGAACTTGTTTGCTTCCCCATTCAGGAAGATCCTGAAAGCAGCGAGGAAGATGTGAATGTAAATACCATGGCCGATATGAGCATGAAGAGAATGGATTCATCTCTGAAAAGAAGCTCCATTAGAGAACCACTGCGTGACATTACTGAAAAGAATGAAGGTATTTTGGATCCAACTCATGAAGTTGAGAGGGGTAGTTTAGAATCTGTAAGTACAGAAATCAGTGTGAGTGAGATGCATAATGAATACACTAAAAAGAATGAAACGCATCATCAAAGCAGACAGAGAAAGCAAGGAAAAGAGAACCAGAGTTTGTCAATTGGTGTGAACAGCATAATGAAGCACTCTACATCATGTAGTATTCGGCATAGCAAACCAAAGCTATCTGGAAAATCTAGCTTGAGAAGCAGAGGGCAAAGTCTGTCAGAGAAGGATCCAAGATGCAGTAACCTTAGTAGAGCGCAAAGTTTGTCGGAGAAGGAACCAAGACGCAATAACATTGTGTCCAATGTGAAATCCTTTGTTTCACTCGTTCAACAAAAACAGGCAGCTGCAGCTGTCCCTGCAAAGAGAGATGTAAGAATCAAGGCTCTGGAAGCAGCAGAGGCTGCCAAGCGTCTTGCAGAAAAGAGAGAGAATGAACGGAAGCAGAAGAAAGAAGTGCTGAAACTTGAGCGTGCAAGAGTAGAGCAAGAAAATTTGAAGCAAATGGAACTAAAGAAAAAATTGAAAGAAGAGGAAAAGAAGAAACGAGATGCTGAGAATGCAGCAAGGAAAAGACAGAGAGAAGAAGAAGAGAGAAAAGAGAAGGAAAAGAAAAGAAAACGCATTGAAGAAGCCCGATGTCATAAAAAGGAAGCAGAAGACAAGATTCATGCTTGGAAGGAGGAATCGAAATGTGGAACTCAGGATGGGAGAGAGCGTGAAAAGGACTTTAGCAACGAACTAGAAAATCAAGTTGACAGAGAAGCGGAAAATATTCCAAGAAAGCCATTGACAGAAGAGGTTGGAACTGAGAGAATAGAAGCTGATTCTGCGATTCCCACCATTGACAATAAAACTTCTACTTGTTCTTCTGATACTGGAAAGGTAGCGAGCATAGGTGTTGCTGAATTCTCAACACCTAGTTGTGATAAAACCAACCAGCCCAGTAGCCATACAAGCCAAGAACAGTCGTATGATATATCACCATACCAATGTTCGGATGATGAAGAGGAAGAAGAAGAAGAAATACCAAACAAGAAGTTTATCCCAACATGGGCCAGTAAAAGTCGTGTGGCAGTGGCATTATCCTCTCTGAAACAATTTGATCCCGATTCAATATTCACTCCTGGAAGCTTTTGCAGTTTGGAGGAAGTTCTTTTACCCAGAAGGCTACCACAGAAACAGGGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163309.p1 GENE.S_Transcript_163309~~S_Transcript_163309.p1 ORF type:complete len:1418 (+),score=360.24,INCENP_ARK-bind|PF03941.11|1.7e-08 S_Transcript_163309:165-4418(+)
MAKIEKLFVQIFERKRWIIEHLNQQKQLYDQHLASKLLIQGITPPPWLLSPQFPSSTCSDLTELNKEELISGILLPRPGTLATYPSGPCFVYDRPVAKAANDDQRHETCTRTCASSTGFDANDPGIVPTCRVHQMEDELGVVHPSRVDGTEDMVNYVPMSPEDQTDLIVSSTYSKAEQSLARIQRSRSRQKALELRNSAKASAKCHLGKEDDAGKISETRSCREGQQLDGLRESLELVKSSTLSAEPCSKEEAAAGDCSDKGRSEAHCKKTSRSGHNEAEVQSLNHEKKKEKSNDYGEHNTSSRSRCPQSITEDYHNDRKSREVYLGRITRSRSGNARQPETSDPQNQRITRSKSCNTQFINADHAIRSSKVYCGRITRSKSCGAKQAEKWDNGSRTKNDMSVKPKQLDFDEVEESCLSDFPAKGQDKPEEKTTLNVAECSASTPCAISTELFSEPHVESFACETLEIFDGEAVRLFPGSDRTSGKTSFMPDCLPDSQVTQECLLGNTVDHASDPNSSGPNADRMAEISSQKHTCEPDGASVGLADSRETQEHLLGNTEEYASDLNSSRPDADGGAASFSSQKHTSLSSVSLADSQVSQEHLVGNTRRRIGYELFNKSASPSVRVNPFVSKESIPRNSSAGGADNSSHILQKSITSQELNDMLSNVDFSAVETHQSGKCSLNKESGLTPEVKKGEVDLERSVMMPLTCEHKNSSTSYDSKWKTAEPSDCFSDEGELRADPESAILFKGLVCSDLECAADVADHNAGEKSTSTKIVVEPRQYFHEVDAFTFSVGSPVIEQMDACVSNADEIAPEFTSFIIAEKEDSEQSAAVKPIQGELPFMGDITEKTSLPGKMCRAASLSTPASPFPSSYKLHLTPGVYRSVPKGLLENIDLASNQLSHGSALEEKSYSDYYSFPGSRLNWDIGKPFISPVGEGLEEIKSKSGGSNKRVSGNPELVCFPIQEDPESSEEDVNVNTMADMSMKRMDSSLKRSSIREPLRDITEKNEGILDPTHEVERGSLESVSTEISVSEMHNEYTKKNETHHQSRQRKQGKENQSLSIGVNSIMKHSTSCSIRHSKPKLSGKSSLRSRGQSLSEKDPRCSNLSRAQSLSEKEPRRNNIVSNVKSFVSLVQQKQAAAAVPAKRDVRIKALEAAEAAKRLAEKRENERKQKKEVLKLERARVEQENLKQMELKKKLKEEEKKKRDAENAARKRQREEEERKEKEKKRKRIEEARCHKKEAEDKIHAWKEESKCGTQDGREREKDFSNELENQVDREAENIPRKPLTEEVGTERIEADSAIPTIDNKTSTCSSDTGKVASIGVAEFSTPSCDKTNQPSSHTSQEQSYDISPYQCSDDEEEEEEEIPNKKFIPTWASKSRVAVALSSLKQFDPDSIFTPGSFCSLEEVLLPRRLPQKQG*

Click here to download the sequence:
Link to NCBI Protein BLAST