Transcript Information: S_Transcript_16334.p1


Annotated TAIR IDAT2G23840.1
Annotated Gene NameHNH endonuclease
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:10153982-10155600 | Reverse length=284
E-Value2E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 121.746623866462
Replicate 222.441008807072
Replicate 321.182799730307
Condition 2: 8 Hour
Replicate 119.497499718522
Replicate 227.485414043093
Replicate 327.162480090919
Condition 3: 24 Hour
Replicate 124.341441603805
Replicate 221.109721639684
Replicate 324.645540532999


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16334.p1 GENE.S_Transcript_16334~~S_Transcript_16334.p1 ORF type:5prime_partial len:175 (-),score=21.68,HNH|PF01844.19|1.6e-13,HNH_4|PF13395.2|1.1e-07 S_Transcript_16334:132-656(-)
GAGATATGGATGTTTCTGTCCTGTTTGAGAGAAAACTGGGTTTTCATTTCTCTCTCTTCCTCTCTCCTAGAATCCGAGGCTGATGTTCTGGAATATTATGATCAGACTGTAAGCTCACCTAGTGGATCATTTAACATACCAGCTGTACTACGGGTTCCACATTTACTTCAGGTTGTGAAGAGAAAAAGAGTCCGCAACACCCTTAGTCGAAAAAATATTTTACATCGGGATGATTACATGTGTCAGTACTGTTATGCTACAAAAGAATTGACCATAGACCATGTTGTTCCGATTTCACGAGGAGGAAAGTGGGAATGGGAAAACCTGGTCACAGCTTGTGCCAAATGCAACTCAAAGAAGGGTCAGAAAACTTTGGAAGAAGCAAACATGAGCCTGATTAAAGTCCCAAAGGCACCGAAAGAGTATGACATACTTGCGATACCCCTGACTAGTGCAGCCGTAAGGATGCTGAAACTCAGAAAAGGGACGCCTGAAGAATGGCGTCAATATTTGCCGCATTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16334.p1 GENE.S_Transcript_16334~~S_Transcript_16334.p1 ORF type:5prime_partial len:175 (-),score=21.68,HNH|PF01844.19|1.6e-13,HNH_4|PF13395.2|1.1e-07 S_Transcript_16334:132-656(-)
EIWMFLSCLRENWVFISLSSSLLESEADVLEYYDQTVSSPSGSFNIPAVLRVPHLLQVVKRKRVRNTLSRKNILHRDDYMCQYCYATKELTIDHVVPISRGGKWEWENLVTACAKCNSKKGQKTLEEANMSLIKVPKAPKEYDILAIPLTSAAVRMLKLRKGTPEEWRQYLPHS*

Click here to download the sequence:
Link to NCBI Protein BLAST