Transcript Information: S_Transcript_16336.p1


Annotated TAIR IDAT2G23840.1
Annotated Gene NameHNH endonuclease
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:10153982-10155600 | Reverse length=284
E-Value8.8E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.1847115546546
Replicate 26.5256138127861
Replicate 35.9744074637016
Condition 2: 8 Hour
Replicate 19.0107283030139
Replicate 29.7679902511482
Replicate 38.4062497597109
Condition 3: 24 Hour
Replicate 19.8455812915354
Replicate 28.2994239575357
Replicate 311.190061954383


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_16336.p1 GENE.S_Transcript_16336~~S_Transcript_16336.p1 ORF type:5prime_partial len:142 (-),score=32.27 S_Transcript_16336:471-896(-)
GGGTATACAAGGAAAGTGAGAGTTTTGGCTTCTAATAGGAGTAGTAGTGGTAGTAGTAGTAGTTCAAGCAAATCAGTTAATGGGGATATTGAGTCTAGACACAGTTTGAGGGATGAGGCCTTTGATGCTTTATATGAGTTTGAAGATGATGAGGATGATCTCTCTTGTTTCAGGGGTTTGGTTCTTGACATTTCTTACAGACCTGTCAATGTTGTCTGCTGGAAGCGTGCTATATGTCTGGAATTCATGGAGAAGGCTGATGTTCTGGAATATTATGATCAGACTGTAAGCTCACCTAGTGGATCATTTAACATACCAGCTGTACTACGGGTTCCACATTTACTTCAGGTTGTGAAGAGAAAAAGAGTCCGCAACACCCTTAGTCGAAAAAATATTTTACATCGGGATGATTACATGTGTCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_16336.p1 GENE.S_Transcript_16336~~S_Transcript_16336.p1 ORF type:5prime_partial len:142 (-),score=32.27 S_Transcript_16336:471-896(-)
GYTRKVRVLASNRSSSGSSSSSSKSVNGDIESRHSLRDEAFDALYEFEDDEDDLSCFRGLVLDISYRPVNVVCWKRAICLEFMEKADVLEYYDQTVSSPSGSFNIPAVLRVPHLLQVVKRKRVRNTLSRKNILHRDDYMCQ*

Click here to download the sequence:
Link to NCBI Protein BLAST