Transcript Information: S_Transcript_163388.p2


Annotated TAIR IDAT4G28020.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0066 (InterPro:IPR001378); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13933389-13935249 | Reverse length=351
E-Value7.6E-65
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.9570001372423
Replicate 23.8303454092908
Replicate 32.177267454314
Condition 2: 8 Hour
Replicate 12.813766777955
Replicate 23.107201199962
Replicate 33.4046145480178
Condition 3: 24 Hour
Replicate 12.7306104363243
Replicate 20.94432548234781
Replicate 31.7515308614664


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163388.p2 GENE.S_Transcript_163388~~S_Transcript_163388.p2 ORF type:complete len:144 (+),score=28.61,UPF0066|PF01980.12|1.2e+04,UPF0066|PF01980.12|5.2e-09 S_Transcript_163388:367-798(+)
ATGGCAGCTTATGTAATAGGAAAGAAATGGAGAGACCTGAAATCAAAGGTCCATGACCTTGAGATATCTCTCAAGCTTTCTCTTGACAAATGTGCTTCTGAAAGACAAGGTCGCATTAGGGCTCAACAGGCTATGAGGAAAGCATTGTTGCGGCAGAAGAATGACAACTCGGGGCCCACTTCATATCCCATGATTCCAATTGGTACTGTCCAGTCATGCTTCTCTACCAGGAATGGTACTCCCAGACAGCCTTTGATCGTACCTCTTGCCAGAGCATGTTTAATATTTGACCCAGCAAGGGTTCCCCCTGCATCACTTGAAGGTCTTGAAGAGTATTCACATATTTGGATTATATATGTATTCCATTTGAATACTGATTTGGAGAAGTTATGGTCAGAACCTTCTAACTCAAAGATCAAAGCTAAGGAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163388.p2 GENE.S_Transcript_163388~~S_Transcript_163388.p2 ORF type:complete len:144 (+),score=28.61,UPF0066|PF01980.12|1.2e+04,UPF0066|PF01980.12|5.2e-09 S_Transcript_163388:367-798(+)
MAAYVIGKKWRDLKSKVHDLEISLKLSLDKCASERQGRIRAQQAMRKALLRQKNDNSGPTSYPMIPIGTVQSCFSTRNGTPRQPLIVPLARACLIFDPARVPPASLEGLEEYSHIWIIYVFHLNTDLEKLWSEPSNSKIKAKE*

Click here to download the sequence:
Link to NCBI Protein BLAST