Transcript Information: S_Transcript_163390.p2


Annotated TAIR IDAT4G28020.1
Annotated Gene Nameunknown protein; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0066 (InterPro:IPR001378); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:13933389-13935249 | Reverse length=351
E-Value2.6E-80
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.29570001372423
Replicate 20.1225710530973
Replicate 30.10245964490889
Condition 2: 8 Hour
Replicate 10.23694878130148
Replicate 20
Replicate 30.11842137558323
Condition 3: 24 Hour
Replicate 10
Replicate 20
Replicate 30.42036740675194


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163390.p2 GENE.S_Transcript_163390~~S_Transcript_163390.p2 ORF type:complete len:180 (+),score=23.37,UPF0066|PF01980.12|7.1e-32 S_Transcript_163390:354-893(+)
ATGAGGAAAGCATTGTTGCGGCAGAAGAATGACAACTCGGGGCCCACTTCATATCCCATGATTCCAATTGGTACTGTCCAGTCATGCTTCTCTACCAGGAATGGTACTCCCAGACAGCCTTTGATCGTACCTCTTGCCAGAGCATGTTTAATATTTGACCCAGCAAGGGTTCCCCCTGCATCACTTGAAGGTCTTGAAGAGTATTCACATATTTGGATTATATATGTATTCCATTTGAATACTGATTTGGAGAAGTTATGGTCAGAACCTTCTAACTCAAAGATCAAAGCTAAGGTGCGAGTACGTAGGCTGAAAGGTGGGAAAAAGGGGGTATTTGCAACAAGATCTCCCCATCGGCCTACCCCAATTGGACTTACTGTTGCTAAGATTGAAGCAGTACAAGGGCACATGATTCTACTCTCTGGTGTAGATTTGGTTGATGGAACGGTCAGATCCCTCATTCCTTGTTTCTGCTGCAATGCCTGTGACTTATGCAATTCTCTATTGCTGGTGGCTTTATTTATGACAACTTTTCTATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163390.p2 GENE.S_Transcript_163390~~S_Transcript_163390.p2 ORF type:complete len:180 (+),score=23.37,UPF0066|PF01980.12|7.1e-32 S_Transcript_163390:354-893(+)
MRKALLRQKNDNSGPTSYPMIPIGTVQSCFSTRNGTPRQPLIVPLARACLIFDPARVPPASLEGLEEYSHIWIIYVFHLNTDLEKLWSEPSNSKIKAKVRVRRLKGGKKGVFATRSPHRPTPIGLTVAKIEAVQGHMILLSGVDLVDGTVRSLIPCFCCNACDLCNSLLLVALFMTTFL*

Click here to download the sequence:
Link to NCBI Protein BLAST