Transcript Information: S_Transcript_163401.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeHomolog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value7E-46
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.2508508507367
Replicate 22.0855373213571
Replicate 31.5598334001055
Condition 2: 8 Hour
Replicate 12.2280258540288
Replicate 21.4469354841614
Replicate 31.1665389236557
Condition 3: 24 Hour
Replicate 13.1517493593395
Replicate 22.8188820368591
Replicate 31.8822421197848


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163401.p1 GENE.S_Transcript_163401~~S_Transcript_163401.p1 ORF type:internal len:201 (+),score=13.91,RPE65|PF03055.11|7.8e-16 S_Transcript_163401:3-602(+)
GGAGTCAGCCTTCATTCCTTCGTTTCTTCAATCTCCACAATCCTCAGATCTTCTTGCTCGACGGCGGCTTTCTTGGTCAACGGTGACTTTCTTGTTCGACAATGGCCTTGTCCCCTGATACAGATGGATCCCATGAAGATGATCTTAAGAGGCGGATTTCCCCTGCGAGTGGACTTAGAAAAGGTATCGAGACTTGGAGTCATTCCAAAGTATGCTAGTGATGAAAAAGACATGAGGTGGTTTGAAGTTCCAAGACTTAACTTACTTCATGCCATCAATGCATGGGATGAAGTTAACGAGAACGGAACGGCCACCATCACTATGGTGGTCACCAACTCATTATCTCCGGAAAACACATTGGATCAGCTCGATCTTGTCCATGTATTAATAGAGAAGATCACAATAGATCTCAAAACGAGGTTAGTTTCAAGGGAACCATTGTCAAAAAGAAACTTGGACTTGGCCGTCATAAATCCAGCTTATGTAGGGAAGAAGAACAAGTATGTCTACGCAGGTATTGGTGACCCATTGCCCAAATTAAGCGGGATTCTAAAGCTGGATGTATCCATGACCACGGGTGACCAAGAGTGCATAGCCGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163401.p1 GENE.S_Transcript_163401~~S_Transcript_163401.p1 ORF type:internal len:201 (+),score=13.91,RPE65|PF03055.11|7.8e-16 S_Transcript_163401:3-602(+)
GVSLHSFVSSISTILRSSCSTAAFLVNGDFLVRQWPCPLIQMDPMKMILRGGFPLRVDLEKVSRLGVIPKYASDEKDMRWFEVPRLNLLHAINAWDEVNENGTATITMVVTNSLSPENTLDQLDLVHVLIEKITIDLKTRLVSREPLSKRNLDLAVINPAYVGKKNKYVYAGIGDPLPKLSGILKLDVSMTTGDQECIAA

Click here to download the sequence:
Link to NCBI Protein BLAST