Transcript Information: S_Transcript_163404.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeHomolog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value8E-54
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.43156218219212
Replicate 20.9540665754601
Replicate 30.29907139595028
Condition 2: 8 Hour
Replicate 10.69163428055567
Replicate 20.84650238096263
Replicate 31.6130911701067
Condition 3: 24 Hour
Replicate 11.2988849643056
Replicate 21.8376063440282
Replicate 31.0906830013023


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163404.p1 GENE.S_Transcript_163404~~S_Transcript_163404.p1 ORF type:3prime_partial len:185 (+),score=13.10,RPE65|PF03055.11|1.2e-25 S_Transcript_163404:189-740(+)
ATGATGCAACCTTCATATTTACACGATTTTGCTATTACAAGCAAGTTTGCCATATTTCCCGACATCCAGATACAGATGGATCCCATGAAGATGATCTTAAGAGGCGGATTTCCCCTGCGAGTGGACTTAGAAAAGGTATCGAGACTTGGAGTCATTCCAAAGTATGCTAGTGATGAAAAAGACATGAGGTGGTTTGAAGTTCCAAGACTTAACTTACTTCATGCCATCAATGCATGGGATGAAGTTAACGAGAACGGAACGGCCACCATCACTATGGTGGTCACCAACTCATTATCTCCGGAAAACACATTGGATCAGCTCGATCTTGTCCATGTATTAATAGAGAAGATCACAATAGATCTCAAAACGAGGTTAGTTTCAAGGGAACCATTGTCAAAAAGAAACTTGGACTTGGCCGTCATAAATCCAGCTTATGTAGGGAAGAAGAACAAGTATGTCTACGCAGGTATTGGTGACCCATTGCCCAAATTAAGCGGGATTCTAAAGCTGGATGTATCCATGACCACGGGTGACCAAGAGTGCATAGCCGCA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163404.p1 GENE.S_Transcript_163404~~S_Transcript_163404.p1 ORF type:3prime_partial len:185 (+),score=13.10,RPE65|PF03055.11|1.2e-25 S_Transcript_163404:189-740(+)
MMQPSYLHDFAITSKFAIFPDIQIQMDPMKMILRGGFPLRVDLEKVSRLGVIPKYASDEKDMRWFEVPRLNLLHAINAWDEVNENGTATITMVVTNSLSPENTLDQLDLVHVLIEKITIDLKTRLVSREPLSKRNLDLAVINPAYVGKKNKYVYAGIGDPLPKLSGILKLDVSMTTGDQECIAA

Click here to download the sequence:
Link to NCBI Protein BLAST