Transcript Information: S_Transcript_163405.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeHomolog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value5E-25
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10
Replicate 20
Replicate 30
Condition 2: 8 Hour
Replicate 10
Replicate 20.21511392922814
Replicate 30
Condition 3: 24 Hour
Replicate 10.42009391328066
Replicate 20
Replicate 30


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163405.p1 GENE.S_Transcript_163405~~S_Transcript_163405.p1 ORF type:5prime_partial len:104 (+),score=6.64,RPE65|PF03055.11|7.7e-07 S_Transcript_163405:1-312(+)
ATACAGATGGATCCCATGAAGATGATCTTAAGAGGCGGATCTCCCCTGCGAGTGGACCTAGAAAAGGTATCGAGACTCGGAGTCGCTCCAAAGTATGCTAGTGATGAAAAAGACATGAGGTGGTTTGAAGTTCCAAGACTTAACTTACTTCATGCCATCAATGCATGGGATGAAGTTAACGAGAACGGAACGGCCACCATCACTATGGTGGTCACCAACTCATTATCTCCGGAAAACACATTGGATCAGCTCGATCTTGTCCATGTATTAATAGAGAAGATCACAATAGATCTCGAAATCCAGCTTATGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163405.p1 GENE.S_Transcript_163405~~S_Transcript_163405.p1 ORF type:5prime_partial len:104 (+),score=6.64,RPE65|PF03055.11|7.7e-07 S_Transcript_163405:1-312(+)
IQMDPMKMILRGGSPLRVDLEKVSRLGVAPKYASDEKDMRWFEVPRLNLLHAINAWDEVNENGTATITMVVTNSLSPENTLDQLDLVHVLIEKITIDLEIQLM*

Click here to download the sequence:
Link to NCBI Protein BLAST