Transcript Information: S_Transcript_163408.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeOrtholog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value3.2E-222
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1112.90515749587
Replicate 2151.9097709571
Replicate 3157.76859382794
Condition 2: 8 Hour
Replicate 130.184246069175
Replicate 223.170843234003
Replicate 330.731682543272
Condition 3: 24 Hour
Replicate 1286.44719404208
Replicate 2199.79939152833
Replicate 3256.15546225722


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_163408.p1 GENE.S_Transcript_163408~~S_Transcript_163408.p1 ORF type:complete len:532 (-),score=76.10,RPE65|PF03055.11|1.6e-73 S_Transcript_163408:525-2120(-)
ATGCAAACAATGGATGCTTTTTCTTCTTCTTTCCTTTCATCATTACCACAACCAAACCGTGGTCTTAGAATCAAACCTTCATCATCACCCCCTCAACTCAACATTTCTTCAGTGAGAATTGAAGAGAATCCTAGAGCGGCTGTGAATTCACCACCCACCACATTAAGATCAGCTCCCACCACATTGCCAAAATCACCAAAAACCAAAGTCCCTCCACCGTCACCACCACCACCTCTTCCTTCTACTCCCAAAGGTCAGGCCAAAAAGGTGACAACAAGGAGGTCCAAAACACCACCGCCACAACGACCAATACCTTCATTTGGATCAACCATTTTAAAAACCATCGATGATGTGATCAATACCTTTATTGATCCTCCCTCGCGGCCATCAACTGATCCAAGATTTGTGCTCTCAGACAACTTTGCTCCAGTGGAGGAGCTCCCTCCTACGGAATGTGAGACCATTGAGGGGACCCTACCCTTATGCCTCCATGGGGCCTACATCCGCAATGGCCCCAACCCACAATTCCTCCCTCGTGGGCCCTACCACATGTTTGATGGGGATGGCATGCTACATGCCATACGTATATCAGATGGCAAGGCAACCCTATGTAGCCGCTTTGTCAAGACAAACAAGTACAAGATGGAGAATGCAGCAGGAAACAGTGTGTTCCCAAACGTCTTCTCCGGGTTTAACGGCCTTGTAGGGTCTGCAACTCGAGGGACTTTGTCAGCTTTACGGATTGTTTCTGGACAATTTAACTTGATGAACGGATTCGGGTTAGCAAACACTAGCCTAGCCTTCTTTGGAAACCGTCTCTATGCCATAGGTGAATCGGACCTCCCTTACGAGGTACAAGTCACACCAAGCGGAGATATCCAAACAATTGGTAGATCTGACTTTGATGGGAAGCTATTCTTGAGCATGACAGCACACCCCAAGGTCGATCTAGATACCGGTGAGGCCTTTGCCTTTCGTTATGGCCCCATCCCACCATTTGTGACCTACTTTAGATTTGACTCGAAAGGAAACAAATTCCCAGATGTGCCCATCTTCTCAATGCTACAACCAGCCTTCCTACATGACTTTGCCATCACCAAAAAATATGCAATTTTTGGAGACATCCAAATTGGGATGGACCCTCTAGGAATGCTAAGGGGCGGATCTCCAGTGGGTTTGAACCCATCAAAGGTGTCTCGGGTTGGAGTCATTCCAAGGTATGCTAGTGATGAGAAGGACATGAGGTGGTTCGACGTACCAGGGTTCAACATAATTCATGCTATCAATGCGTGGGATGAGATTGAGGAGAATGGGGATGAAACCATTGTCATGGTAGCACCTAATATATTATCCGCTGAACACACATTGGATAAACTGGAGCTTGTTCACGCACTAGTGGAAAAAGTCAGGATTAATCTACGGACTGGGGTTGTAAGTAGACAACCGTTATCAGCAAGGAATCTCGACTTCGGAGTCATAAATCCGGCCTACATGGGGAAGAAGAACAAGTATGTCTACGCAGGTGTTGGTGACCCGTTGCCCAAATTAAGCGGGATTCTAAAGCTGGATGTATCCATGAGCAAGGGCGACCAATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_163408.p1 GENE.S_Transcript_163408~~S_Transcript_163408.p1 ORF type:complete len:532 (-),score=76.10,RPE65|PF03055.11|1.6e-73 S_Transcript_163408:525-2120(-)
MQTMDAFSSSFLSSLPQPNRGLRIKPSSSPPQLNISSVRIEENPRAAVNSPPTTLRSAPTTLPKSPKTKVPPPSPPPPLPSTPKGQAKKVTTRRSKTPPPQRPIPSFGSTILKTIDDVINTFIDPPSRPSTDPRFVLSDNFAPVEELPPTECETIEGTLPLCLHGAYIRNGPNPQFLPRGPYHMFDGDGMLHAIRISDGKATLCSRFVKTNKYKMENAAGNSVFPNVFSGFNGLVGSATRGTLSALRIVSGQFNLMNGFGLANTSLAFFGNRLYAIGESDLPYEVQVTPSGDIQTIGRSDFDGKLFLSMTAHPKVDLDTGEAFAFRYGPIPPFVTYFRFDSKGNKFPDVPIFSMLQPAFLHDFAITKKYAIFGDIQIGMDPLGMLRGGSPVGLNPSKVSRVGVIPRYASDEKDMRWFDVPGFNIIHAINAWDEIEENGDETIVMVAPNILSAEHTLDKLELVHALVEKVRINLRTGVVSRQPLSARNLDFGVINPAYMGKKNKYVYAGVGDPLPKLSGILKLDVSMSKGDQ*

Click here to download the sequence:
Link to NCBI Protein BLAST